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Clostridium perfringens str. 13 (cper0)
Gene : CPE1750
DDBJ      :CPE1750      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  521/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:294 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   140->226 1ak6A PDBj 6e-04 26.2 %
:RPS:PFM   2->157 PF03755 * YicC_N 4e-24 40.3 %
:RPS:PFM   211->294 PF08340 * DUF1732 4e-22 63.1 %
:HMM:PFM   2->159 PF03755 * YicC_N 2.1e-49 35.9 156/159  
:HMM:PFM   210->294 PF08340 * DUF1732 1e-38 60.0 85/87  
:BLT:SWISS 1->294 YLOC_BACSU 1e-48 37.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81456.1 GT:GENE CPE1750 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2026197..2027081) GB:FROM 2026197 GB:TO 2027081 GB:DIRECTION - GB:GENE CPE1750 GB:PRODUCT conserved hypothetical protein GB:NOTE 294 aa, similar to gpu:AP001515_248 BH2514 gene product from Bacillus halodurans (294 aa); 38.4% identity in 294 aa overlap GB:PROTEIN_ID BAB81456.1 LENGTH 294 SQ:AASEQ MVKSMTGFGRATSEEGKERIFSLEMKSVNHRYLDMNIRMPRSMVSLEEKIRNIISSKLSRGKVDIFINYKDYAKNQGVAVLNEDLAKSYVNSLEQLKSLFPNMQDDLSLSLVARYPDVITIEEKSEDLEAIWEEINSLLNMAVENMISMRKVEGEKLASDILVKCSSIEEIVAFIEEKAEVIVASYKQKLEDRLKNLLGEVPVDENRVAMEVAVFADKASIDEEIIRLRSHINQLRKTLTLDEPIGRKLDFIVQEMNREANTIASKSTDLEITNKVIDIKNIIEKIREQVQNIE GT:EXON 1|1-294:0| BL:SWS:NREP 1 BL:SWS:REP 1->294|YLOC_BACSU|1e-48|37.1|286/291| BL:PDB:NREP 1 BL:PDB:REP 140->226|1ak6A|6e-04|26.2|84/174| RP:PFM:NREP 2 RP:PFM:REP 2->157|PF03755|4e-24|40.3|154/158|YicC_N| RP:PFM:REP 211->294|PF08340|4e-22|63.1|84/86|DUF1732| HM:PFM:NREP 2 HM:PFM:REP 2->159|PF03755|2.1e-49|35.9|156/159|YicC_N| HM:PFM:REP 210->294|PF08340|1e-38|60.0|85/87|DUF1732| OP:NHOMO 525 OP:NHOMOORG 522 OP:PATTERN -------------------------------------------------------------------- 111--------------------------------------------------------------------------------21111111111111--11111111111--------------111111111111----------------------------------------------------11-111111111111111111-111111111111---1111111---------------------1---------------------------------------------------------------------11111111111111111111111111-111111111111-1111111-1-1111111-----111111111111111111-11111-11111111111-1111111111111111111-1111111--------1----111-----------------------------------11-111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111-------------------------111111111111111111111111111211121-11111------11111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------1111111111111111111---------11111111111111111111111111111--1-------111111111---------------------------1111111111-11 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 84 STR:RPRED 28.6 SQ:SECSTR ###########################################################################################################################################HTcccccccHHHHGGGccc###EEccccTTccccccccccccccccTTTTcccccHHHHHTccccccccEEcccccccccccccccc#################################################################### PSIPRED cccccccHHHEEEEEcccEEEEEEEEEccccccEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccccEEEcHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //