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Clostridium perfringens str. 13 (cper0)
Gene : CPE1756
DDBJ      :CPE1756      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  102/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.125.1b.36.1c.1.28c.37.1
:445 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   13->255 2a5hA PDBj 2e-08 11.8 %
:RPS:SCOP  5->39 1sotA1  b.36.1.4 * 2e-06 22.9 %
:RPS:SCOP  124->258 1iwmA  b.125.1.2 * 1e-07 11.3 %
:RPS:SCOP  267->350 1yksA2  c.37.1.14 * 9e-05 26.2 %
:HMM:SCOP  5->60 1wi2A_ b.36.1.1 * 1.4e-06 32.1 %
:HMM:SCOP  79->273 1tv8A_ c.1.28.3 * 3e-12 21.5 %
:RPS:PFM   219->431 PF04459 * DUF512 5e-44 44.9 %
:HMM:PFM   219->432 PF04459 * DUF512 4.2e-73 42.6 204/204  
:HMM:PFM   130->204 PF04055 * Radical_SAM 1.4e-09 24.3 74/166  
:HMM:PFM   5->36 PF00595 * PDZ 1.7e-06 46.9 32/81  
:BLT:SWISS 2->56 Y1693_CLOPE 7e-05 38.2 %
:BLT:SWISS 137->206 Y841_METJA 2e-08 36.2 %
:BLT:SWISS 296->371 HIS7_ARCB4 9e-05 31.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81462.1 GT:GENE CPE1756 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2034413..2035750) GB:FROM 2034413 GB:TO 2035750 GB:DIRECTION - GB:GENE CPE1756 GB:PRODUCT conserved hypothetical protein GB:NOTE 445 aa, similar to gp:D90904_134 hypothetical protein from Synechocystis sp. (451 aa); 37% identity in 440 aa overlap GB:PROTEIN_ID BAB81462.1 LENGTH 445 SQ:AASEQ MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVWEFEIEKEYGEDLGVEFEEAILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKETAKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLLRETMAVDIKNKLTKSGKGKFTLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGHTITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPGDITQRIMLDDLTAKDIEERLGVKVIVCSYTGEDLIDLINEHCEEE GT:EXON 1|1-445:0| BL:SWS:NREP 3 BL:SWS:REP 2->56|Y1693_CLOPE|7e-05|38.2|55/335| BL:SWS:REP 137->206|Y841_METJA|2e-08|36.2|69/415| BL:SWS:REP 296->371|HIS7_ARCB4|9e-05|31.1|74/190| RP:PDB:NREP 1 RP:PDB:REP 13->255|2a5hA|2e-08|11.8|238/400| RP:PFM:NREP 1 RP:PFM:REP 219->431|PF04459|5e-44|44.9|205/206|DUF512| HM:PFM:NREP 3 HM:PFM:REP 219->432|PF04459|4.2e-73|42.6|204/204|DUF512| HM:PFM:REP 130->204|PF04055|1.4e-09|24.3|74/166|Radical_SAM| HM:PFM:REP 5->36|PF00595|1.7e-06|46.9|32/81|PDZ| RP:SCP:NREP 3 RP:SCP:REP 5->39|1sotA1|2e-06|22.9|35/78|b.36.1.4| RP:SCP:REP 124->258|1iwmA|1e-07|11.3|133/177|b.125.1.2| RP:SCP:REP 267->350|1yksA2|9e-05|26.2|84/291|c.37.1.14| HM:SCP:REP 5->60|1wi2A_|1.4e-06|32.1|56/0|b.36.1.1|1/1|PDZ domain-like| HM:SCP:REP 79->273|1tv8A_|3e-12|21.5|191/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 106 OP:NHOMOORG 106 OP:PATTERN ------------------------------------------------------1111---------- ---1--------------------------------------------------------------------------1111------------------------------------------------------11111---1-1111111111111111111111111111111111111111-----------------------------------------------------------------------------------------------------------------------------------------11111111111111111111111111-----11111111-1111111---11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 412 STR:RPRED 92.6 SQ:SECSTR ####EccccccccTTccccccHHHHTTccTTcTTcHHHHHHcccGGGGcccTTccccTTcTTTccccTTEEcccccEEcEEEEEEEcccccTTcTTTTTTTccccccHHHHHHcEEEEEEccTTcccHHHHHHHHHHHHTcTTccEEEEEccHHHHcGGGccHHHHHHGGGHHHHHHHTTccEEEEEEccTTTTccHHHHHHHHHHHHTTEEEEEEEcccccTTcGGGcccHHHHcHHHHHHTTcTTccGGGccEccEEET######cHHHHcTTHHHHHHTTTTccHHHHTTEEEE##############EEEEcccTHHHHHTccHHHHHHHHHHHHHHHTTcccEEEEEEcccccccccccccHH###HHHHHHHHHTcccEEEEEcTTc#####ccccHHHHTTTTTHHHHHHHHHTcEEEcccccTTcHHHHHHHHHHH# DISOP:02AL 1-2, 443-445| PSIPRED cccccccccccccHHHcccccccEEEEEcccccHHHHHHHHHccccEEEEEEEcccccEEEEEEEcccccccccEEcHHHccccccccccccEEEEEccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHccccEEEEEEEcccHHHHHHHHccccHHHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEcccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccccccHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccccEEEEEEEHHHHHHHHccccccccEEEEccHHHHcccccccccccEEEEcccHHHHHHHcccEEEEEcccHHHHHHHHHHccccc //