[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Clostridium perfringens str. 13 (cper0)
Gene : CPE1847
DDBJ      :CPE1847      probable fibronectin-binding protein
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  293/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
a.202.1b.40.4d.17.1
:575 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->284 3doaA PDBj 2e-32 36.8 %
:BLT:PDB   271->442 2du7A PDBj 5e-04 27.8 %
:RPS:PDB   1->284 3doaA PDBj 2e-29 31.8 %
:RPS:SCOP  3->121 1jb7A2  b.40.4.3 * 2e-27 11.1 %
:RPS:SCOP  320->443 1r5iD  a.202.1.1 * 8e-07 13.7 %
:RPS:SCOP  451->494 2gu3A2  d.17.1.6 * 2e-11 13.6 %
:RPS:PFM   5->418 PF05833 * FbpA 2e-47 35.8 %
:RPS:PFM   458->543 PF05670 * DUF814 2e-20 52.3 %
:HMM:PFM   4->451 PF05833 * FbpA 1.9e-138 39.5 443/453  
:HMM:PFM   460->544 PF05670 * DUF814 1.2e-31 44.7 85/90  
:BLT:SWISS 1->573 YLOA_BACSU e-108 37.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81553.1 GT:GENE CPE1847 GT:PRODUCT probable fibronectin-binding protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 2117443..2119170 GB:FROM 2117443 GB:TO 2119170 GB:DIRECTION + GB:GENE CPE1847 GB:PRODUCT probable fibronectin-binding protein GB:NOTE 575 aa, similar to pir:G69877 fibronectin-binding protein homolog yloA from Bacillus subtilis (572 aa); 39.3% identity in 573 aa overlap GB:PROTEIN_ID BAB81553.1 LENGTH 575 SQ:AASEQ MALDGIYLYNLINELKDSLINSRIDKINQPEKDEIIINVRGKENKKLLISSSSKYPRLHFTTISKNNPLQPPVFCMVLRKYLTGGRIIDIYQQSTDRIVSIDIANKDEMGFDSVYTLVVEIMARHSNISLVRKRDNKIMESIKHITANKNSFRVLYPGVSYVFPPASEKLNPFDFSKEDLKIELSKNNNELDEKIFSKLLTGVGKNLSLEMYSLFKSQFGASYVFDDIFNFICNYFNNIFKDIQNIIFYKNEKIIDFYFKDLSILNHCTKEVYDNSSELLDAFFANKDKQDRLHAKSADIQRLVNTNIDRCLKKIKVLEKTLEECDKKEEFKIKGELLTSYIYSIKKGDKSVDLLNYYSEDEEYLTILLDENKTPSENIQFYFKKYNKLKKAEESALEQLAINEDELKYLNSVSSSIQVADNYEDIDAIKNELIETGYIRFRRNNNGKKKEKQSKPYHYVSSDGIDIYVGKNNIQNDYLTLKFADKNDTWLHTKDIPGSHVIVKSSNIPDKTLEEAANLAVFYSKGKGGTKIPVDYTLVKNVKKPSGSKPGMVIYSTNKTVYMDSPKEINLEKLK GT:EXON 1|1-575:0| BL:SWS:NREP 1 BL:SWS:REP 1->573|YLOA_BACSU|e-108|37.9|565/572| SEG 228->240|ifnficnyfnnif| BL:PDB:NREP 2 BL:PDB:REP 1->284|3doaA|2e-32|36.8|261/266| BL:PDB:REP 271->442|2du7A|5e-04|27.8|158/539| RP:PDB:NREP 1 RP:PDB:REP 1->284|3doaA|2e-29|31.8|264/266| RP:PFM:NREP 2 RP:PFM:REP 5->418|PF05833|2e-47|35.8|399/417|FbpA| RP:PFM:REP 458->543|PF05670|2e-20|52.3|86/90|DUF814| HM:PFM:NREP 2 HM:PFM:REP 4->451|PF05833|1.9e-138|39.5|443/453|FbpA| HM:PFM:REP 460->544|PF05670|1.2e-31|44.7|85/90|DUF814| RP:SCP:NREP 3 RP:SCP:REP 3->121|1jb7A2|2e-27|11.1|117/124|b.40.4.3| RP:SCP:REP 320->443|1r5iD|8e-07|13.7|124/214|a.202.1.1| RP:SCP:REP 451->494|2gu3A2|2e-11|13.6|44/65|d.17.1.6| OP:NHOMO 345 OP:NHOMOORG 327 OP:PATTERN --------------------------------111111-11---1----1111-1111111------- ----------------------------------------------------------------------------------------------------------111---------------111-1111111111111---1111111111111111-11111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111112111111111111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1-----------1-111111--11111111111-1--------111111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111-1-------------------------1111111111--- ------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------11128322111------21----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 477 STR:RPRED 83.0 SQ:SECSTR ccccHHHHHHHHHHHG#GGTTcEEEEEEEEETTEEEEEEEETTEEEEEEEccTTTEEccTTTcEEEEEccccHHHHHHHHHHTTcEEEEEEEcTTccEEEEEEEEEcTTccEEEEEEEEEccGGGcEEEEEETTTccEEEEcccccc####cccccTTcccccccccccccGGGccHHHHGGGccGGGccHHHHHHHHcTTTccHHHHHHHHTHTTcccccTTHHHH###HHHHHHHHHTcccccEEccTTTccccEEccccTTcccccEEccccHHHHHHHHTccccccccccccccTTTTcccEEEccccTTccccEEEcccccccccEEcccccccHHHHHHHHccccccccccccccccccTTTcTTTTTcccHHHHHHHHHHHccTTccc##HHHTccccccTTTTTcccccccGGGcccccTTTGGGGTccccccccccccccccccccHHHHHHHHHTTcccccccccccTTTccccccc######################################################################################## DISOP:02AL 292-302, 435-455| PSIPRED ccccHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEEEcccccEEEEEEcccccEEEEEEccccccccccHHHHHHHHHHcccEEEEEEEccccEEEEEEEcccccccccccEEEEEEEEcccccEEEEEccccEEEEEEEEccccccccEEEEccccEEccccccccccccccHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEccccEEEEEEccHHHHHHHHHHHcccccEEEEEEEccccEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEHHEEEcccccccEEEEEEEEEEEEEEccHHHHHHHcc //