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Clostridium perfringens str. 13 (cper0)
Gene : CPE1926
DDBJ      :CPE1926      two-component sensor histidine kinase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  836/915 : Eukaryota  109/199 : Viruses  1/175   --->[See Alignment]
a.121.1a.274.1a.30.2d.122.1
:507 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   278->499 3dgeA PDBj 2e-21 33.0 %
:RPS:PDB   199->252 2aswA PDBj 5e-07 31.5 %
:RPS:PDB   278->506 2bu8A PDBj 8e-31 14.9 %
:RPS:SCOP  200->252 2aswA1  a.274.1.1 * 2e-06 30.2 %
:RPS:SCOP  278->359 1rktA2  a.121.1.1 * 2e-14 11.0 %
:RPS:SCOP  379->506 1mu5A3  d.122.1.2 * 4e-20 12.5 %
:HMM:SCOP  256->342 2c2aA1 a.30.2.1 * 5.4e-19 37.9 %
:HMM:SCOP  343->495 2c2aA2 d.122.1.3 * 3.4e-33 33.6 %
:RPS:PFM   196->247 PF00672 * HAMP 3e-04 26.9 %
:RPS:PFM   280->339 PF00512 * HisKA 3e-06 38.3 %
:RPS:PFM   391->495 PF02518 * HATPase_c 1e-10 32.7 %
:HMM:PFM   389->497 PF02518 * HATPase_c 4.5e-22 29.0 107/111  
:HMM:PFM   275->340 PF00512 * HisKA 6.7e-20 43.9 66/68  
:HMM:PFM   183->248 PF00672 * HAMP 1.3e-14 25.8 66/70  
:HMM:PFM   326->374 PF09023 * Staphostatin_B 0.00077 28.6 49/107  
:HMM:PFM   4->67 PF08391 * Ly49 0.00065 25.4 63/119  
:BLT:SWISS 196->255 TLPA_BACSU 6e-05 31.7 %
:BLT:SWISS 278->500 PHOR_BACSU 7e-32 36.1 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81632.1 GT:GENE CPE1926 GT:PRODUCT two-component sensor histidine kinase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 2206684..2208207 GB:FROM 2206684 GB:TO 2208207 GB:DIRECTION + GB:GENE CPE1926 GB:PRODUCT two-component sensor histidine kinase GB:NOTE 507 aa, similar to prf:1502267A phoR gene from Bacillus subtilis (579 aa); 38.1% identity in 223 aa overlap. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT GB:PROTEIN_ID BAB81632.1 LENGTH 507 SQ:AASEQ MKKSISKRLFIITFGIIIFLTLFTMIFQITFFQEFYYKRKSNDLSNAVLKFRALYSYDIKNTDSLYRALSLFELENNAKIGIYSIDSTPKYVPDPANKNSEAVDLLNDIFNELYSDQDFAKTLLNSNSGVTTEFKSRKYSTKYIVYMVPFSLNSKNDSIIIAITSFQAIEEASALIKDFYKYIILIVIVIGLILSYVFSNLISKPLVKLNKSAKKMSAMDFSEKCDIEREDEIGNLAKTLNFLSKNLSNALDDLKIKNKKLEEDIEKERELEKLRKDFIAGASHELKTPIGIISGYAEGIKDGIVDHKDQGVYLDIIIDEAEKMNKLVMDMLELSKLEAGKIDLHIIDFSLTELTEEVLVKNSVDINKNNLTVIKNYSPNEDLYVQGDDFKIEQVLTNFVTNAIKYSEPNNQIIIDIKPVEEDKIYFSIENTGAHIPDSDINKIWTQFYRGDTSRNRGSRSTGLGLSIVKNLLQAHESEFGVMNTENGVKFYFTLKKSKEIDEVEEI GT:EXON 1|1-507:0| BL:SWS:NREP 2 BL:SWS:REP 196->255|TLPA_BACSU|6e-05|31.7|60/662| BL:SWS:REP 278->500|PHOR_BACSU|7e-32|36.1|219/579| COIL:NAA 31 COIL:NSEG 1 COIL:REGION 243->273| TM:NTM 2 TM:REGION 9->31| TM:REGION 183->205| SEG 9->32|lfiitfgiiifltlftmifqitff| SEG 183->194|iiliviviglil| SEG 259->277|kkleediekereleklrkd| BL:PDB:NREP 1 BL:PDB:REP 278->499|3dgeA|2e-21|33.0|212/237| RP:PDB:NREP 2 RP:PDB:REP 199->252|2aswA|5e-07|31.5|54/56| RP:PDB:REP 278->506|2bu8A|8e-31|14.9|201/359| RP:PFM:NREP 3 RP:PFM:REP 196->247|PF00672|3e-04|26.9|52/69|HAMP| RP:PFM:REP 280->339|PF00512|3e-06|38.3|60/69|HisKA| RP:PFM:REP 391->495|PF02518|1e-10|32.7|104/112|HATPase_c| HM:PFM:NREP 5 HM:PFM:REP 389->497|PF02518|4.5e-22|29.0|107/111|HATPase_c| HM:PFM:REP 275->340|PF00512|6.7e-20|43.9|66/68|HisKA| HM:PFM:REP 183->248|PF00672|1.3e-14|25.8|66/70|HAMP| HM:PFM:REP 326->374|PF09023|0.00077|28.6|49/107|Staphostatin_B| HM:PFM:REP 4->67|PF08391|0.00065|25.4|63/119|Ly49| GO:PFM:NREP 7 GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 200->252|2aswA1|2e-06|30.2|53/54|a.274.1.1| RP:SCP:REP 278->359|1rktA2|2e-14|11.0|82/123|a.121.1.1| RP:SCP:REP 379->506|1mu5A3|4e-20|12.5|128/218|d.122.1.2| HM:SCP:REP 256->342|2c2aA1|5.4e-19|37.9|87/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 343->495|2c2aA2|3.4e-33|33.6|152/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 10445 OP:NHOMOORG 969 OP:PATTERN -----------------------14---21-2--11-12222417-297LG39--------------4 6HR3A45677752456655-56225755555477A737553857544356438683361155G362787B5333364444F7512455cbuV-a112--D6L6GBeGWOg--------------2213934252A5XWSRPC67k2tZkiUUEBC67121342LR9Qtv*H321221131212HB5333449AGUUVTWSTVKWSXZWQFHGFEFVXhACDQ7NG999A89lX57767666667776665675A6768863546665587655565575BCB745553366666666666555555555655542334132366aJLxTTSVWWWRUQFXUTCIJFRMG589GFF2ZWQH9846756575227AFIVTTE34344CAIJMBB8HHGFF55555555549-BCIBFFEIBDL4DFFHHFDKKHDC9ADBI83475875G84444444433223fHH11111111114911111111111121111346A2242217IEDDKHB7887HHIRBBAB59HIKAJDM-4BE9SFE56KEECC3AGK7A79H4111121243D8GwQRRB79aE5*VHGI2eccibagHDFAQAYr8D72143-----1---------8744B44FD9WKJM8VOEFBFFEEFEGDCCGEELDHN--285F8------EECBBC9EDDFEEFFDE-DGFDEEEDDEDDEEEEEEDEFG88A97FEDFEGFEEFGFGFFHECB8DCDE6-CDDEEFFCDEEE--366666678776Cg6P333223121122112BBAAC59364BIGIMGDRNQGGFLGIHHI222213312AHKJLDEEEEKLMPPDDJGKGGFGG3333--*2QQ9AFG----11-13-2-------------------------59556454441T2 --1-CC1------1D34544454656344333333334444444442655453834443656221----2--211------2222222-2514241213244367B-71B------------------------------------------------3--------------2--244N1-1-2X34B56D2-71222 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- STR:NPRED 308 STR:RPRED 60.7 SQ:SECSTR ######################################################################################################################################################################################################HHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHHHHHGGGGccTTcHHHHHHHHHHccccTTccccccccccHHHHHHHHHHHHHHHHHHHHHHHHTccHTccccccccccTTcEEEEEHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHcccccEEEEEEEcccTTcccEEEEcHHHHHHHHHHHHHHHHHHHHHTTTTccccccEcccEEEEEEEEEEEcccHHHHGGGGcTTTTccccccccccccccHHHHHHHHHHHTTcEEEEEEETTEEEEEEEEEccTTTccccc# DISOP:02AL 1-2, 501-507| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccEEEEEEEEcccHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHccccEEEEEcccccccEEEEEEEEEEEEccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEEccccccEEEEcHHHHHHHHHHHHHHHEEEcccccEEEEEEEEccccEEEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccEEEEEEEcccEEEEEEEEcccccccHHcc //