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Clostridium perfringens str. 13 (cper0)
Gene : CPE1936
DDBJ      :CPE1936      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  59/68 : Bacteria  752/915 : Eukaryota  173/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:206 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->201 2zwrB PDBj 6e-27 37.5 %
:RPS:PDB   1->189 2bc2A PDBj 6e-28 18.2 %
:RPS:SCOP  1->199 1qh3A  d.157.1.2 * 1e-30 28.0 %
:HMM:SCOP  1->200 1qh5A_ d.157.1.2 * 6.3e-58 43.7 %
:RPS:PFM   14->164 PF00753 * Lactamase_B 2e-07 33.8 %
:HMM:PFM   11->183 PF00753 * Lactamase_B 1.5e-31 24.1 170/194  
:BLT:SWISS 1->206 YCBL_ECOLI 2e-41 40.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81642.1 GT:GENE CPE1936 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2218379..2218999) GB:FROM 2218379 GB:TO 2218999 GB:DIRECTION - GB:GENE CPE1936 GB:PRODUCT conserved hypothetical protein GB:NOTE 206 aa, similar to sp:YCBL_ECOLI HYPOTHETICAL 23.8 KDA PROTEIN IN MUKB-ASPC INTERGENIC REGION from Escherichia coli (215 aa); 39.8% identity in 206 aa overlap GB:PROTEIN_ID BAB81642.1 LENGTH 206 SQ:AASEQ MLIKTIPVGMYQANCYVVIDEETKDCIMVDPGEEASRIENVIESLDAKPKMILLTHGHFDHVGAVQKLAEKYKIPFYIDKKDEDMIERNVDVFGKLPKADGYLKDGDTLKFSDNYEIKCLETPGHTPGGLCFLIDNCLFTGDTLFRESIGRSDFEGGNHATLLKSINDKLVPLGDDIVVYPGHGPSSTIKHERQRNPFLAGDFYVY GT:EXON 1|1-206:0| BL:SWS:NREP 1 BL:SWS:REP 1->206|YCBL_ECOLI|2e-41|40.0|205/215| BL:PDB:NREP 1 BL:PDB:REP 1->201|2zwrB|6e-27|37.5|192/207| RP:PDB:NREP 1 RP:PDB:REP 1->189|2bc2A|6e-28|18.2|181/217| RP:PFM:NREP 1 RP:PFM:REP 14->164|PF00753|2e-07|33.8|145/171|Lactamase_B| HM:PFM:NREP 1 HM:PFM:REP 11->183|PF00753|1.5e-31|24.1|170/194|Lactamase_B| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00753|IPR001279| RP:SCP:NREP 1 RP:SCP:REP 1->199|1qh3A|1e-30|28.0|182/260|d.157.1.2| HM:SCP:REP 1->200|1qh5A_|6.3e-58|43.7|183/260|d.157.1.2|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 1874 OP:NHOMOORG 984 OP:PATTERN 11----1132222322--11111-2533322311-111111112211221312121111121111-11 1122242444422334455-5533445555544555345622322-13----333222--33324452343-------1113211111211111221--3-113342322--------------21111111-1-1222111112-23-12211111------222111111--11-1-11--12222--1225333333331344323114423332232323222212132122312322322223122111----------------------1111111111111111111111111111111111111111111111112112111122111123222111121111211111111112111111111112222212221213335323214222222222222-252252314432133231332234232211-1-1--22122222222-1121111-----------------------------233211211--3333322111133221111113232424-23323222221411-2324412221111111222321242211112231111111212222112143331111111111111111111111111221213332221222222-31222131111212-142121-----21222222222222222-22222222222222222222222211222222222222222222222222222222222222222221222222111123312111212122121222444443324232222223311222222-122222222222221222222221211-1-11---11-1223222111---------2-2-------------------------11-1112-11251 1---222-1--2234111222223132111111-11111111111111222-12-11-1222111----11111111211-1111111-2311221112111-332--224542321112-12122111282-212-2113112223111211121-236632532-1232242211-2D1111-53652931322212 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 205 STR:RPRED 99.5 SQ:SECSTR EEEEEEEcccEEEEEEEEEETTEEcEEEEcccHHHHHHHHHHHHHTccEEEEEcccccHHHHTTHHHHHHTTcEEEccHHHHHHHHHTTHHHHHGccccccccccEEEEEETTEEEEEEcccccccccccEEEETTEEEEETcccTTcccccccccccHHHHHHHHHHHHHHccccccEEEcccccccTHHHHHHHHHHHEcccc# PSIPRED cEEEEEEccccccEEEEEEEccccEEEEEcccccHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHcccEEEcHHHHHHHHHHHHHHcccccccEEEEcccEEEEEcccEEEEEEccccccccEEEEEccEEEEccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHccccccccccc //