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Clostridium perfringens str. 13 (cper0)
Gene : CPE1953
DDBJ      :CPE1953      bacterial hemoglobin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  338/915 : Eukaryota  70/199 : Viruses  0/175   --->[See Alignment]
a.1.1
:144 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->142 4vhbA PDBj 2e-48 67.9 %
:RPS:PDB   1->141 1ekmA PDBj 6e-32 16.9 %
:RPS:SCOP  1->143 1cqxA1  a.1.1.2 * 1e-53 51.0 %
:HMM:SCOP  2->145 1vhbA_ a.1.1.2 * 1.9e-41 36.1 %
:RPS:PFM   9->103 PF00042 * Globin 3e-05 28.4 %
:HMM:PFM   7->102 PF00042 * Globin 2.5e-17 28.1 96/108  
:BLT:SWISS 1->142 BAHG_VITST 2e-52 66.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81659.1 GT:GENE CPE1953 GT:PRODUCT bacterial hemoglobin GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2241885..2242319) GB:FROM 2241885 GB:TO 2242319 GB:DIRECTION - GB:GENE CPE1953 GB:PRODUCT bacterial hemoglobin GB:NOTE 144 aa, similar to gp:AB028630_2 bacterial hemoglobin from Clostridium perfringens (144 aa); 100% identity in 144 aa overlap GB:PROTEIN_ID BAB81659.1 LENGTH 144 SQ:AASEQ MLDQKTIDIIKSTVPVLKSNGLEITKTFYKNMFEQNPEVKPLFNMNKQESEEQPKALAMAILAVAQNIDNLEAIKPVVNRIGVIHCNAKVQPEHYPIVGKHLLGAIKEVLGDGATEDIINAWAKTYGVIAEVFINNEKEMYASR GT:EXON 1|1-144:0| BL:SWS:NREP 1 BL:SWS:REP 1->142|BAHG_VITST|2e-52|66.9|142/146| BL:PDB:NREP 1 BL:PDB:REP 1->142|4vhbA|2e-48|67.9|134/138| RP:PDB:NREP 1 RP:PDB:REP 1->141|1ekmA|6e-32|16.9|136/656| RP:PFM:NREP 1 RP:PFM:REP 9->103|PF00042|3e-05|28.4|95/108|Globin| HM:PFM:NREP 1 HM:PFM:REP 7->102|PF00042|2.5e-17|28.1|96/108|Globin| GO:PFM:NREP 2 GO:PFM GO:0005506|"GO:iron ion binding"|PF00042|IPR000971| GO:PFM GO:0020037|"GO:heme binding"|PF00042|IPR000971| RP:SCP:NREP 1 RP:SCP:REP 1->143|1cqxA1|1e-53|51.0|143/150|a.1.1.2| HM:SCP:REP 2->145|1vhbA_|1.9e-41|36.1|144/144|a.1.1.2|1/1|Globin-like| OP:NHOMO 476 OP:NHOMOORG 408 OP:PATTERN -------------------------------------------------------------------- ----1--1111--11------1---1-------1111111-1----11----11111----1--2112211------------1------------------1----1------------------------------------1-21------------------1------------------1-------2111111111111111111111111-111111------1111111111111111111112------------------------------------------------------------------------------------------111---------------------------1-21--------1-1-2---1--11------------12312212--------------1111-----1-------1111111111111----------------------------------13--111111111111111122111111111211121--111---1-111-1-11-11112-------------------------------------------3-------111111--------------11111---1-11111111-1-111-1--1-12-------------11-11111111111111-111111111111111111111111111111111111111111111111111--111111111111--------------2111---------------1111111-111-11111111111111-1-1---------11111111111111----------1111--------------------------------------------------------2-- ----221----1---1-1122122222-------------------1122222422122222112-11111121111-11133315-1-1----1-111---------4-1----------------------------------------------------1-----------------1-------1--112112- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 144 STR:RPRED 100.0 SQ:SECSTR TTccccHHHHHHHHHHHHHHTTTccEEEEEEEEEcccGGHHHHHHHHHccccccccEEEEEEEETTcccEEEEcHHEEETTTTEEEEEEEETTccccccHHHHTTHHHHHHcHHHHHHHHHTTccGGGGGGEEEEEEEcccccc DISOP:02AL 45-55, 142-144| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //