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Clostridium perfringens str. 13 (cper0)
Gene : CPE2030
DDBJ      :CPE2030      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:275 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   85->101 PF02380 * Papo_T_antigen 0.00073 35.3 17/93  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81736.1 GT:GENE CPE2030 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2320796..2321623) GB:FROM 2320796 GB:TO 2321623 GB:DIRECTION - GB:GENE CPE2030 GB:PRODUCT hypothetical protein GB:NOTE 275 aa, similar to gpu:AP001516_78 BH2649 gene product from Bacillus halodurans (274 aa); 23.3% identity in 202 aa overlap. 6 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB81736.1 LENGTH 275 SQ:AASEQ MKVSKGNFKKLSYLLNLQILRDLKITIGSAVGIMLLNIAYFSYSLSDELKIYLEKTENIGAIQMFSPMEPFSSFVSRINGRILTLLILGCFCLYCWYLWLGEFKGENKSAYTLLTLPLPKKFIIIYKFLSACFYYFSLVFFQIVALLINYIIFNIMVPTDAIVKESLITILSSSISNFYGLIPVSFVNLITNGLFFIAMIILTFLFAILERSFGVKGGILGVILGCSFLFLVLIFPGKMDFYMFERFIWFVFISILYNLFGLFYSKYLLEKKVHV GT:EXON 1|1-275:0| TM:NTM 6 TM:REGION 16->38| TM:REGION 79->100| TM:REGION 108->130| TM:REGION 132->154| TM:REGION 184->206| TM:REGION 217->238| SEG 166->176|slitilsssis| SEG 214->225|gvkggilgvilg| HM:PFM:NREP 1 HM:PFM:REP 85->101|PF02380|0.00073|35.3|17/93|Papo_T_antigen| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHEEEEccccccEEEEccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //