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Clostridium perfringens str. 13 (cper0)
Gene : CPE2062
DDBJ      :CPE2062      flavodoxin
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  42/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.5
:141 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->141 2fz5A PDBj 3e-23 40.3 %
:RPS:PDB   1->141 2arkB PDBj 2e-20 27.1 %
:RPS:SCOP  4->139 1flaA  c.23.5.1 * 6e-34 33.3 %
:HMM:SCOP  1->143 2arkA1 c.23.5.8 * 6.2e-30 35.5 %
:RPS:PFM   6->128 PF00258 * Flavodoxin_1 1e-04 30.6 %
:HMM:PFM   6->129 PF00258 * Flavodoxin_1 4e-15 16.3 123/143  
:BLT:SWISS 4->141 FLAV_MEGEL 9e-23 40.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81768.1 GT:GENE CPE2062 GT:PRODUCT flavodoxin GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2359768..2360193) GB:FROM 2359768 GB:TO 2360193 GB:DIRECTION - GB:GENE CPE2062 GB:PRODUCT flavodoxin GB:NOTE 141 aa, similar to sp:FLAV_MEGEL FLAVODOXIN from Megasphaera elsdenii (137 aa); 39.1% identity in 138 aa overlap GB:PROTEIN_ID BAB81768.1 LENGTH 141 SQ:AASEQ MSKVSVIYWSNGGNVEVLANTIADELTDLGAEVLIKHVSNAKVEDVLEADAVALGSPSMDNNRIEQYDMEPFVNQFKLTPNNNKKMILFGSYGWDNGEFMVEWVKRMKDYGFDVVGSLAVNESPNDDEINSAKELAKKLIK GT:EXON 1|1-141:0| BL:SWS:NREP 1 BL:SWS:REP 4->141|FLAV_MEGEL|9e-23|40.3|134/137| BL:PDB:NREP 1 BL:PDB:REP 4->141|2fz5A|3e-23|40.3|134/137| RP:PDB:NREP 1 RP:PDB:REP 1->141|2arkB|2e-20|27.1|140/179| RP:PFM:NREP 1 RP:PFM:REP 6->128|PF00258|1e-04|30.6|121/137|Flavodoxin_1| HM:PFM:NREP 1 HM:PFM:REP 6->129|PF00258|4e-15|16.3|123/143|Flavodoxin_1| GO:PFM:NREP 2 GO:PFM GO:0010181|"GO:FMN binding"|PF00258|IPR008254| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00258|IPR008254| RP:SCP:NREP 1 RP:SCP:REP 4->139|1flaA|6e-34|33.3|135/138|c.23.5.1| HM:SCP:REP 1->143|2arkA1|6.2e-30|35.5|141/0|c.23.5.8|1/1|Flavoproteins| OP:NHOMO 65 OP:NHOMOORG 48 OP:PATTERN -----------------------1---------1-1--------------221--------------- ------------------------------------------------------------------------------1111------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------111241112112312-1111222-2-11-11--11----1------1-21-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-1-------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 141 STR:RPRED 100.0 SQ:SECSTR cEEEEEEEcccccHHHHHHHHHHHHHTcTTEEEEEEETTTccHHHHHHccEEEEEEEccTcccHHHHHHHHTcGGGTTcccTTcEEEEEEEEccTTccHHHHHHHHHHHTTcEEccEEEEcccccHHHHHHHHHHHHHHHH PSIPRED ccEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHccEEEEEccccccccccHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHHHHcccEEEccEEEEEEccHHHHHHHHHHHHHHcc //