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Clostridium perfringens str. 13 (cper0)
Gene : CPE2073
DDBJ      :CPE2073      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:202 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   14->78 PF02659 * DUF204 5.2e-08 32.8 64/67  
:HMM:PFM   138->196 PF02659 * DUF204 0.00022 19.0 58/67  
:HMM:PFM   112->125 PF00036 * efhand 0.00014 50.0 14/29  
:PROS 30->45|PS00012|PHOSPHOPANTETHEINE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81779.1 GT:GENE CPE2073 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 2375540..2376148 GB:FROM 2375540 GB:TO 2376148 GB:DIRECTION + GB:GENE CPE2073 GB:PRODUCT conserved hypothetical protein GB:NOTE 202 aa, similar to pir:H69987 hypothetical protein ytaF from Bacillus subtilis (159 aa); 34% identity in 144 aa overlap. Putative N-terminal signal sequence and 4 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB81779.1 LENGTH 202 SQ:AASEQ MSFLSILLFVIAASLDILVVSLAYGLKDIKINFSSTLVIASISALGTFISMILGKFLVDLIPIKLGDIIGGLVLLLLGFYSIYSYFKEKKILTSHNSENDSSPTFILENPEVADKDKSGNIDFKESLALSLALALNNFGLGIGASISGLNIAFTTISTFIISLIFISLGFYLSKTIKSKNISKNSNLIAGIIIIILSLFIIF GT:EXON 1|1-202:0| PROS 30->45|PS00012|PHOSPHOPANTETHEINE|PDOC00012| TM:NTM 6 TM:REGION 3->25| TM:REGION 31->53| TM:REGION 61->83| TM:REGION 123->145| TM:REGION 151->173| TM:REGION 181->202| SEG 65->78|lgdiigglvllllg| SEG 126->135|slalslalal| SEG 153->168|fttistfiislifisl| SEG 176->201|iksknisknsnliagiiiiilslfii| HM:PFM:NREP 3 HM:PFM:REP 14->78|PF02659|5.2e-08|32.8|64/67|DUF204| HM:PFM:REP 138->196|PF02659|0.00022|19.0|58/67|DUF204| HM:PFM:REP 112->125|PF00036|0.00014|50.0|14/29|efhand| OP:NHOMO 14 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------11----------------------------------------------------------------------------------------------------------22----------1---1111-1--------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 88-102| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHcccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //