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Clostridium perfringens str. 13 (cper0)
Gene : CPE2079
DDBJ      :CPE2079      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:164 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   144->158 PF03729 * DUF308 0.00042 26.7 15/26  
:HMM:PFM   34->138 PF12304 * BCLP 0.00066 25.7 105/188  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81785.1 GT:GENE CPE2079 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 2384713..2385207 GB:FROM 2384713 GB:TO 2385207 GB:DIRECTION + GB:GENE CPE2079 GB:PRODUCT hypothetical protein GB:NOTE 164 aa, similar to pir:E82970 hypothetical protein PA5409 from Pseudomonas aeruginosa (strain PAO1) (186 aa); 28.3% identity in 106 aa overlap. Putative N-terminal signal sequence and 5 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB81785.1 LENGTH 164 SQ:AASEQ MEKSAQIFCILEGILMAIVGILFFIKPMDSLLYFTIVAGILIIGSGIFTIIKAFKSSRKGLYIFTGIISVLFGLMLCFVPLESIDVLVIFYGSWALVNGIFLLVGEFTYKSFGFNATTLYSILLIILGLLILFEPISFLIATPFIIGVYFIIIAVFEIYLGFKL GT:EXON 1|1-164:0| TM:NTM 5 TM:REGION 3->25| TM:REGION 32->54| TM:REGION 60->82| TM:REGION 86->108| TM:REGION 129->151| SEG 39->51|giliigsgiftii| SEG 122->132|illiilgllil| HM:PFM:NREP 2 HM:PFM:REP 144->158|PF03729|0.00042|26.7|15/26|DUF308| HM:PFM:REP 34->138|PF12304|0.00066|25.7|105/188|BCLP| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //