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Clostridium perfringens str. 13 (cper0)
Gene : CPE2107
DDBJ      :CPE2107      hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:1081 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   672->738 PF07550 * DUF1533 4e-05 40.3 %
:RPS:PFM   791->854 PF07550 * DUF1533 1e-07 53.3 %
:HMM:PFM   99->164 PF07550 * DUF1533 1.8e-16 29.2 65/65  
:HMM:PFM   196->266 PF07550 * DUF1533 1.2e-17 27.7 65/65  
:HMM:PFM   469->528 PF07550 * DUF1533 1.6e-13 37.3 59/65  
:HMM:PFM   557->624 PF07550 * DUF1533 3.8e-17 28.1 64/65  
:HMM:PFM   671->738 PF07550 * DUF1533 3.8e-21 32.8 64/65  
:HMM:PFM   791->859 PF07550 * DUF1533 1e-22 46.2 65/65  
:HMM:PFM   1005->1072 PF07550 * DUF1533 7.5e-19 39.7 63/65  
:BLT:SWISS 36->269 EZRA_STRGC 7e-06 25.8 %
:BLT:SWISS 450->569 Y755_AQUAE 2e-04 31.8 %
:BLT:SWISS 981->1065 AROK_FUSNN 8e-04 28.2 %
:REPEAT 3|650->748|771->868|984->1081
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81813.1 GT:GENE CPE2107 GT:PRODUCT hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2415180..2418425) GB:FROM 2415180 GB:TO 2418425 GB:DIRECTION - GB:GENE CPE2107 GB:PRODUCT hypothetical protein GB:NOTE 1081 aa, partially similar to pir:T28317 ORF MSV156 hypothetical protein from Melanoplus sanguinipes entomopoxvirus (1127 aa); 21% identity in 675 aa overlap GB:PROTEIN_ID BAB81813.1 LENGTH 1081 SQ:AASEQ MNKKKLSILTAIIAISACSISKTASAAPSKILTFTNMPVWDYHQRNYDKHGNLRISTAKTTFNLNNEEEKASYIPMFKVDEAELNSPINIQCELKTDEQKDWFEKINKVTLEDATKNPSLERNLEFEKSENKIIIKGNQKALDNNKLHTIKIYSEGKDWAAISVNIVQAEPIKVLVSYPMNPRTGEDVRFKLDNFNYAILNPVNKVFLTHNNVRKELVKFKDYHVISEYLTVYAENVDTEEGNLLEPGKYTLEIYADGFKKAEKDFEVIKNEVIASEKNNSKDNIKVKPVTSKITNKEIKPSSVDTLSSASVGSSKGADNSGSEETSGASIIMQTNLIYNHDLLANALILNELGLGTEESEGIAKRFELNTISWDAVINEDGTHINDFRDYLNAVKDAALKGNYLTYDEYLKNENSKEYKNRPYNVKEVLEDNLLGDAQNFRTVLGLETPSLEVKSAVMDKDLILESSDESYLKNIKSITINGGIKELDKSLYSIKDNQLIINSKVVKGDKIKILISATGYKDKVIEIKLEKILDDINLKLEKEYKTGEAVVVTGLSEDFIKNINSIKLDGKLLLTKEQGGSSGNTYYEISENKLTLKSGLFKEDKNYKLEIDSRYYGKKELEFNITKGDQKSNEKTEIIEEKKELPKIDVKIDSKSTFMKKYDIKFLNSGEWINNITGVSVNGVEYKSGLVWGDSKDRYAVYKSDNNIGIGYEGFKQNEDNIIKIKAKGYNDFTFIISKDGQIVLDKEEKESANIEEKSEVEKEIDFTNNISISKESILIKKYNIKFLNSEEWLKNITDISVNGVQYKSGLSWWESKERYAIYEADKTLAIGYESFNNEGENLIKIKSKGYKEYAFIIKDGQITLVQDEKKVESEDTNKEVIKNEENKKGETKEEIKEKEEAQNGENKESSINKDENKEDAKEKENGKVENKDGDKEEAKEVEEKVEVKEEDSKKETEKQDVEKENKEVEENKQNAEKDFSGNIPTITKSFFGDKYDLKFLGADEWLKNVESVYVNDVEYEKKPLIWGDSAGRCNILESDSTIAIGIGNFNKDENIIKIKSKGYKEYKFIIKDGKISLVK GT:EXON 1|1-1081:0| BL:SWS:NREP 3 BL:SWS:REP 36->269|EZRA_STRGC|7e-06|25.8|217/574| BL:SWS:REP 450->569|Y755_AQUAE|2e-04|31.8|107/242| BL:SWS:REP 981->1065|AROK_FUSNN|8e-04|28.2|85/100| NREPEAT 1 REPEAT 3|650->748|771->868|984->1081| SEG 3->27|kkklsiltaiiaisacsisktasaa| SEG 632->649|ksnekteiieekkelpki| SEG 772->783|isiskesilikk| SEG 879->902|nkevikneenkkgetkeeikekee| SEG 914->927|nkdenkedakeken| SEG 933->979|kdgdkeeakeveekvevkeedskketekqdvekenkeveenkqnaek| RP:PFM:NREP 2 RP:PFM:REP 672->738|PF07550|4e-05|40.3|63/65|DUF1533| RP:PFM:REP 791->854|PF07550|1e-07|53.3|60/65|DUF1533| HM:PFM:NREP 7 HM:PFM:REP 99->164|PF07550|1.8e-16|29.2|65/65|DUF1533| HM:PFM:REP 196->266|PF07550|1.2e-17|27.7|65/65|DUF1533| HM:PFM:REP 469->528|PF07550|1.6e-13|37.3|59/65|DUF1533| HM:PFM:REP 557->624|PF07550|3.8e-17|28.1|64/65|DUF1533| HM:PFM:REP 671->738|PF07550|3.8e-21|32.8|64/65|DUF1533| HM:PFM:REP 791->859|PF07550|1e-22|46.2|65/65|DUF1533| HM:PFM:REP 1005->1072|PF07550|7.5e-19|39.7|63/65|DUF1533| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 277-325, 576-595, 618-638, 711-725, 741-793, 823-992| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccEEEcccHHHHHccccEEEcccHHEEcccccHHHHHccHHEEEcHHHcccccEEEEEEEcccHHHHHHHHHHHEEEcccccccHHHHHHHHHHccEEEEEccHHHHccccEEEEEEEEEcccEEEEEEEEEEcccEEEEEEEccccccccEEEEEEccccHHHHccHHHEEEcHHHccHHHHHHHHHHcccHHHEEEEEccccccccccccccEEEEEEEccHHHccccEEEccccEEccHHccHHHHccccccccEEccccccccccHHHHHHHccccccccccccccccccHHEEEccccccHHHHHccHHHHHccccHHHHHHHHHHHHHccccHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHccccccccccccHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcccHHHccccHHHHHHcccEEEEEccHHHHHHHHHHcccHHEEHHHHHcccccEEEEEEEccccccEEEEHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHcccEEEEHHHcccccccEEEcccccccccHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccHHcccHHHccccEEEEccccccccccccccHHHHHHcccccccccccccccccccccccHHHccccccEEEEccccccccccHHHHHccccccccccccccEEEEcccccccccHHHccccccccHHHHHcccccccccEEcccccHHHHccHHcccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccHHHccHHccccHHcccccccHHHHccccccccccHHHcccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccHHHEEEEEcccccccEEEEEEEcEEEcccHHcccccccccEEEccccEEEEccccccccccEEEEEccccccEEEEEEccEEEEEc //