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Clostridium perfringens str. 13 (cper0)
Gene : CPE2133
DDBJ      :CPE2133      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  143/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.175.1c.1.28
:617 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   249->492 3c8fA PDBj 4e-13 13.7 %
:RPS:SCOP  290->468 1m98A1  a.175.1.1 * 9e-28 16.3 %
:HMM:SCOP  224->589 1oltA_ c.1.28.2 * 5.3e-50 23.1 %
:RPS:PFM   264->425 PF04055 * Radical_SAM 3e-06 30.9 %
:HMM:PFM   261->420 PF04055 * Radical_SAM 2.6e-20 23.7 156/166  
:BLT:SWISS 41->515 Y966_METJA 1e-25 30.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81839.1 GT:GENE CPE2133 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2442996..2444849) GB:FROM 2442996 GB:TO 2444849 GB:DIRECTION - GB:GENE CPE2133 GB:PRODUCT conserved hypothetical protein GB:NOTE 617 aa, similar to pir:H72336 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (599 aa); 41.3% identity in 605 aa overlap GB:PROTEIN_ID BAB81839.1 LENGTH 617 SQ:AASEQ MVRITDDILYRVEKPSRYVGGELNEVIKDPKEVDIRFGFCFPDVYEVGMSHLGSRILYHVLNQRKDTYCERVYAPWPDMEKLMRENNIPLYALETKDPINEFNFLAFTLQYEMSYTNILNMLNMGGIPLRASERTEKDPLVIAGGPCAYNPEPLYDIVDIFQLGEGEEGLNDLLDLYQKHKDNFNKEAYLREASHIPSVYIPSLYDVTYNEDGTIKEFIPKYDDVPKKVKKRIINNFDQVDFPESLIVPYSEIVHDRVVLELFRGCTNGCRFCQAGMIYRPVREKSRKTLLDQARKMLKATGYDEVSLVSLSTCDYSDIQGLVKDLIEEHGKNNVSVALPSIRVDAFSVDLLKEIQKVRKTGLTFAPEAGSQRMRDVINKGLSEERILEAAKNAFESGWSTIKLYFILGVPYETVEDAAEIGLLAEKIADQYFAVPKHIRNKGLRITVSTSILVPKPFTPFQWAPMEKMDIVTEKINAVKGAIKSRSIVYNYHEQKTSYMEAVLARGDRRLCDVLIKAYEKGAKFDGWSEYFDFELWQEALAECNVDGDFYVYRQRSYDEILPWDFIDIGVTRKYLERENEKAKTGEPTQNCRKGCTGCGVNVNFKDGECFEGAILN GT:EXON 1|1-617:0| BL:SWS:NREP 1 BL:SWS:REP 41->515|Y966_METJA|1e-25|30.1|392/444| SEG 163->176|lgegeeglndlldl| SEG 220->231|pkyddvpkkvkk| RP:PDB:NREP 1 RP:PDB:REP 249->492|3c8fA|4e-13|13.7|227/245| RP:PFM:NREP 1 RP:PFM:REP 264->425|PF04055|3e-06|30.9|152/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 261->420|PF04055|2.6e-20|23.7|156/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 290->468|1m98A1|9e-28|16.3|166/174|a.175.1.1| HM:SCP:REP 224->589|1oltA_|5.3e-50|23.1|342/0|c.1.28.2|1/1|Radical SAM enzymes| OP:NHOMO 260 OP:NHOMOORG 176 OP:PATTERN 111111----------1-111111--------11221111111-1---1----1----------1--- ----1-----------------------------------1111----------------11111-11111-------1111-----------------------------------------------------------222--2222222222222222222222222-22----2--2-111--23-------------------------------------------------------------------------------------------------------------------------------------11111111111111111111111111--1-111111111111111112---21----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2212121122111-22222222222222222----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------22-2232333--- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-18-1-2--------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 409 STR:RPRED 66.3 SQ:SECSTR ########################################################################cccEEccEEEEEccTTccGGGcccccTTccHHHHHHHHHHHHHHHHHHHTTEEEEEEEEccEEEcccccEEcccEE#############################TTEEcccccHHHHHTcTTccccccHHEHHTTccTTcTTcHHHHHHcccGGGGcccTTccccTTcTTTccccEEEEEcTTEEEEEEEcccccccTTcccGGGccTTEEEcHHHHHHHHHGGGHHHHTcTTcEEEEEEccGGGGHHHHHHHHHHHHTTTccEEEEEEccccccccHHHHHHHHTccEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHTccEEEEEEEcTTTTccHHHHHHHHHHHHHTTcccccEEHHHHHHccEEEEEEEEcccccHHHHHHTTcTcccccHHHHHHHHHHHHTTTcccccTTTEEEEccccEEEEccc########################################################################################################### PSIPRED ccHHHHHHHHHcccHHHHHccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHccccccEEcccccccccccEEEEEccccccHHHHHHHHHHccccHHHHHHcccccEEEEcccccccHHHHHccccEEEEcccHHHHHHHHHHHHHccccccHHHHHHHHHccccEEEcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEEEccccccccEEEEccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHcccccEEEccccccHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccHHHcccccHHHHHHHHHHHHHHHHHcccEEccccccHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHcccHHHHHHHHcccccHHHHccccccHHHccccHHHcccccHHHHHHHHHHHHccccccHHHcccccccccccccccEEEEEcccc //