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Clostridium perfringens str. 13 (cper0)
Gene : CPE2330
DDBJ      :CPE2330      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  59/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:430 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->122 1y8cA PDBj 4e-04 29.8 %
:RPS:PDB   366->430 2bu8A PDBj 2e-04 12.7 %
:RPS:SCOP  322->403 2nxoA1  c.94.1.1 * 9e-04 21.0 %
:RPS:PFM   8->430 PF12128 * DUF3584 4e-05 25.4 %
:HMM:PFM   20->77 PF03993 * DUF349 2.7e-09 26.3 57/77  
:HMM:PFM   80->153 PF03993 * DUF349 8.8e-16 32.4 74/77  
:HMM:PFM   157->230 PF03993 * DUF349 1.1e-19 40.5 74/77  
:HMM:PFM   237->308 PF03993 * DUF349 1e-20 40.3 72/77  
:HMM:PFM   311->341 PF03993 * DUF349 0.00027 29.0 31/77  
:HMM:PFM   346->389 PF08336 * P4Ha_N 0.00025 27.3 44/134  
:BLT:SWISS 29->429 CI093_HUMAN 2e-10 28.2 %
:COIL
:REPEAT 5|17->70|75->147|152->224|229->301|306->371

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82036.1 GT:GENE CPE2330 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 2682169..2683461 GB:FROM 2682169 GB:TO 2683461 GB:DIRECTION + GB:GENE CPE2330 GB:PRODUCT conserved hypothetical protein GB:NOTE 430 aa, partially similar to gp:SCL2_1 hypothetical protein SCL2.01 from Streptomyces coelicolor A3(2) (328 aa); 24.4% identity in 197 aa overlap GB:PROTEIN_ID BAB82036.1 LENGTH 430 SQ:AASEQ MTTNESNYIDENKNPIETEDFAKALAAEEENSCKRKKEVIEKIRSLAKSAQNWKEANKEFNALLEEFNNIYYYDQETENTLKSELREAKNEFYTARKEFFEKANEGFKENAEKKEDVIKRLEALVYTSDIKACDMLAKSLSEEFYAIGFAGKELNTELYDRFKKARNAAQETRKAAMEGLREEFGNKADRKREIISELKALVNNENWKEATEKFNALCDEFKGIGFSGKEGNEEISLGYKEAKDAFFAKRQEFFDALKAENKVNIEKRKALIEELKKLYENDSWKEASAKVKEISDEFFKIGFCGKEENEKLINEFKEIRDGFYAARQEYFDKINAARANKQKDFLNSLLKNKDEFVKKLKKYISQDEERLSDFTNRLFNVRPGNNSLETIEKYQEIVEDIKGRIESNKAKVKEVQNEMHEIRNELNNLK GT:EXON 1|1-430:0| BL:SWS:NREP 1 BL:SWS:REP 29->429|CI093_HUMAN|2e-10|28.2|354/1326| COIL:NAA 42 COIL:NSEG 1 COIL:REGION 389->430| NREPEAT 1 REPEAT 5|17->70|75->147|152->224|229->301|306->371| BL:PDB:NREP 1 BL:PDB:REP 9->122|1y8cA|4e-04|29.8|104/244| RP:PDB:NREP 1 RP:PDB:REP 366->430|2bu8A|2e-04|12.7|63/359| RP:PFM:NREP 1 RP:PFM:REP 8->430|PF12128|4e-05|25.4|398/1179|DUF3584| HM:PFM:NREP 6 HM:PFM:REP 20->77|PF03993|2.7e-09|26.3|57/77|DUF349| HM:PFM:REP 80->153|PF03993|8.8e-16|32.4|74/77|DUF349| HM:PFM:REP 157->230|PF03993|1.1e-19|40.5|74/77|DUF349| HM:PFM:REP 237->308|PF03993|1e-20|40.3|72/77|DUF349| HM:PFM:REP 311->341|PF03993|0.00027|29.0|31/77|DUF349| HM:PFM:REP 346->389|PF08336|0.00025|27.3|44/134|P4Ha_N| RP:SCP:NREP 1 RP:SCP:REP 322->403|2nxoA1|9e-04|21.0|81/272|c.94.1.1| OP:NHOMO 68 OP:NHOMOORG 65 OP:PATTERN -------------------------------------------------------------------- ----1-11-111111--11-1---1-1111111-----111--11-1----1-1-111---1-111-1111-----------------11111111----11111-11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------- -1--------------------------------------------------------------------------------------------------------------------------------4---1--------1---------1-------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 167 STR:RPRED 38.8 SQ:SECSTR ########TTGGGGcccHHHHHHHHHHHH#TTEEEEEEEEEEEEcHHHHHTTT##TTccEE##EEETTEEEEEEEEEETTEEEEE#####EEEEEccccEEEEEEEEEEEcccHHHHHHHHH###################################################################################################################################################################################################################################################TTTHHHHHHHHHHHH##HTTTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHH DISOP:02AL 1-6, 427-430| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //