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Clostridium perfringens str. 13 (cper0)
Gene : CPE2355
DDBJ      :CPE2355      thioredoxin
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  872/915 : Eukaryota  177/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:104 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->104 2o7kA PDBj 2e-26 53.1 %
:RPS:PDB   1->104 1cqgA PDBj 2e-23 33.0 %
:RPS:SCOP  2->104 1r26A  c.47.1.1 * 9e-23 23.5 %
:HMM:SCOP  2->106 2trcP_ c.47.1.6 * 3.1e-43 49.0 %
:RPS:PFM   7->101 PF00085 * Thioredoxin 6e-21 47.4 %
:HMM:PFM   2->102 PF00085 * Thioredoxin 1.8e-38 43.6 101/104  
:BLT:SWISS 5->104 THIO_CYACA 2e-26 50.0 %
:PROS 22->40|PS00194|THIOREDOXIN_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82061.1 GT:GENE CPE2355 GT:PRODUCT thioredoxin GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2714056..2714370) GB:FROM 2714056 GB:TO 2714370 GB:DIRECTION - GB:GENE CPE2355 GB:PRODUCT thioredoxin GB:NOTE 104 aa, similar to sp:THIO_CYACA THIOREDOXIN. from Chloroplast Cyanidium caldarium (107 aa); 50% identity in 100 aa overlap GB:PROTEIN_ID BAB82061.1 LENGTH 104 SQ:AASEQ MVKHINDQDFNTEVIEASEVVVVDFWATWCGPCKMIAPVIEELANEMENVKFVKVDVDKNPGSAGKYQIQSIPTLLIFKDGKVVDTLVGFRPKAALVEAIKKYV GT:EXON 1|1-104:0| BL:SWS:NREP 1 BL:SWS:REP 5->104|THIO_CYACA|2e-26|50.0|100/107| PROS 22->40|PS00194|THIOREDOXIN_1|PDOC00172| SEG 50->59|vkfvkvdvdk| BL:PDB:NREP 1 BL:PDB:REP 5->104|2o7kA|2e-26|53.1|98/103| RP:PDB:NREP 1 RP:PDB:REP 1->104|1cqgA|2e-23|33.0|103/105| RP:PFM:NREP 1 RP:PFM:REP 7->101|PF00085|6e-21|47.4|95/103|Thioredoxin| HM:PFM:NREP 1 HM:PFM:REP 2->102|PF00085|1.8e-38|43.6|101/104|Thioredoxin| GO:PFM:NREP 1 GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF00085|IPR013766| RP:SCP:NREP 1 RP:SCP:REP 2->104|1r26A|9e-23|23.5|102/113|c.47.1.1| HM:SCP:REP 2->106|2trcP_|3.1e-43|49.0|104/0|c.47.1.6|1/1|Thioredoxin-like| OP:NHOMO 2172 OP:NHOMOORG 1087 OP:PATTERN -----1232222222211-----225313112-----1-----2212222111--------111--22 1123522222222222223-24113222222253332264322222122211332231--3322332434311111111111311222223313111--11123123222111111111111111331332333233223311231545455622332222224321665611111111111122222--22111111111111111111111111111111111111111221111111111111111111111212213111332212322332111111111121111111111111111111111111121111111111-122111111131312221221211123131111221111222211-12211222511111223231123223222222222223-123124223421222222222222222222222222222222222221221222111111111111111111111111111111-2233122122222233411123322222222222222211322223433233321114311221111111112222232312121211111121111211443456212111111111111111111121223442212323321222222121222212112111-1222411-11122221222222222122-2222222222222222222222331112222222222222222222222221122222222222211112222222223141211111111111111121112112222222223322233331222222222222411112222222222222232222222222351221111---1--1-111----1-1-1-111---1111--11-----------221 21-12-3-2-1-33423221543736322221221-1222122222123364442321222232222123223233332322221122-33332232323112241-3A562143211---22121---462-112-1-11-111-211-1113-51253222533-534256435763g34334EAAL2E82332321 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 100.0 SQ:SECSTR cEEEEccHHHHHHHHHHHTEEEEEccccccHHHHHTHHHHHHHHHHTTTEEEEEEcTTTcHHHHHHHTcccccEEEEEETTEEEEEEEcccHHHHHHHHHHHHc DISOP:02AL 104-105| PSIPRED cEEEEcHHHHHHHHHHccccEEEEEEcccccHHcccHHHHHHHHHHccccEEEEEEccccHHHHHHcccccccEEEEEEccEEEEEEEccccHHHHHHHHHHHc //