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Clostridium perfringens str. 13 (cper0)
Gene : CPE2356
DDBJ      :CPE2356      isoaspartyl dipeptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  97/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
b.92.1c.1.9
:389 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->389 1pojA PDBj 6e-79 40.5 %
:RPS:PDB   1->389 2aqoB PDBj 1e-35 37.2 %
:RPS:SCOP  1->66 2ftyA1  b.92.1.3 * 2e-10 16.7 %
:RPS:SCOP  57->346 1onwA2  c.1.9.13 * e-103 41.9 %
:RPS:SCOP  322->384 2p9bA1  b.92.1.10 * 2e-07 25.4 %
:HMM:SCOP  57->346 1onwA2 c.1.9.13 * 1.5e-84 38.5 %
:RPS:PFM   53->360 PF01979 * Amidohydro_1 3e-06 32.0 %
:HMM:PFM   53->360 PF01979 * Amidohydro_1 5.5e-17 20.4 284/328  
:BLT:SWISS 4->389 IADA_ECOLI 1e-78 40.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82062.1 GT:GENE CPE2356 GT:PRODUCT isoaspartyl dipeptidase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2714487..2715656) GB:FROM 2714487 GB:TO 2715656 GB:DIRECTION - GB:GENE CPE2356 GB:PRODUCT isoaspartyl dipeptidase GB:NOTE 389 aa, similar to gpu:AP001511_18 isoaspartyl dipeptidase from Bacillus halodurans (391 aa); 47.7% identity in 386 aa overlap GB:PROTEIN_ID BAB82062.1 LENGTH 389 SQ:AASEQ MLKVIKNIEVYDPEYLGKKDIVILSDKIEGLYDSVNIPKDFINIQVIDGEGMIAVPGFIDCHVHIIGGGGEGGFRTRTPELQLSSIIKGGITTLVGCIGTDGVCRDMKGLVAKAHALCEEGVTCYCYTGSYDVPVNTITKTIKSDLLLIDKVIGVGEIALSDHRSSQPTYEQFVNIVAQARVGGLLSGKAGIVNVHLGNGKRMIEYITRLINETEIPANQIIPTHMGRSRELFEAGINHAKAGGQIDLTTSSDPQHLEEGEVRAGEGLKKLLDAGVDIEKITFSSDGNGSMPLFDENGELKGLGICSVESLFNEVKEAIKLGVPLEKAIRVITSNVANVLKLSHKGFISTGKDADIILLDKKNLDINSVISRGNILMDNKKLLVKGTFE GT:EXON 1|1-389:0| BL:SWS:NREP 1 BL:SWS:REP 4->389|IADA_ECOLI|1e-78|40.4|376/390| SEG 67->73|ggggegg| BL:PDB:NREP 1 BL:PDB:REP 4->389|1pojA|6e-79|40.5|375/387| RP:PDB:NREP 1 RP:PDB:REP 1->389|2aqoB|1e-35|37.2|366/374| RP:PFM:NREP 1 RP:PFM:REP 53->360|PF01979|3e-06|32.0|256/271|Amidohydro_1| HM:PFM:NREP 1 HM:PFM:REP 53->360|PF01979|5.5e-17|20.4|284/328|Amidohydro_1| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF01979|IPR006680| RP:SCP:NREP 3 RP:SCP:REP 1->66|2ftyA1|2e-10|16.7|66/156|b.92.1.3| RP:SCP:REP 57->346|1onwA2|e-103|41.9|270/271|c.1.9.13| RP:SCP:REP 322->384|2p9bA1|2e-07|25.4|63/118|b.92.1.10| HM:SCP:REP 57->346|1onwA2|1.5e-84|38.5|283/0|c.1.9.13|1/1|Metallo-dependent hydrolases| OP:NHOMO 106 OP:NHOMOORG 104 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------1-------------------------------------------------------------------------------------------------------111111111111-11-111--1-------11---1-2--111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------21------------------------1-----1----11111---------------------------1---1--1111111111-11-111-11111111111---------1111111111-11111-11-111-------------------------------11-------------------------------------------------------111--------1-------------------------------------------------------------11111-1------ ------1----------------------------------------------------------------------------------------------------1-------------------------------------------------------1-------------------111-----1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 389 STR:RPRED 100.0 SQ:SECSTR ccEEEEccEEEcccEEEEcEEEEETTEEEEEEccccTTccccccEEEEcTTcEEEEcEEEEEEcTTccccTTcGGGccccccHHHHHHTTEEEEEEccccccccccHHHHHHHHHHHHHHTcEEEEEEEccccccccccccHHHHHHHcTTEEEEEEEEEccTTcccccHHHHHHHHHHHHHHHHHHTcccEEEEEEcccTTTTHHHHHHHTTccccGGGEEEEcTTccHHHHHHHHHHHHTTccEEEETTccccccHHHHHHHHHHHHHHHHTTccGGGEEEEcccTccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHGGGTHHHHHHTTcTTcccccTTccccEEEEcGTTccEEEEEETTEEEEETTEEccccTTc PSIPRED ccEEEEccEEEccccEEEEEEEEEccEEEEEEccccccccccccEEEEccccEEEEEEEccEEEEcccccccccccccHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHcccHHHHHHHccccHHHHHccHHccccHHHHHHHHHHHHHcccEEEEccccHHHcccHHcccHHHHHHHHHccccccEEEEcccccccccHHHHcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccEEcccccccEEEEEcccccEEEEEEccEEEEEccEEEEEcccc //