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Clostridium perfringens str. 13 (cper0)
Gene : CPE2535
DDBJ      :CPE2535      conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  314/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:455 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   22->183 PF01554 * MatE 9e-09 26.4 %
:RPS:PFM   289->396 PF01554 * MatE 1e-07 25.0 %
:HMM:PFM   22->184 PF01554 * MatE 1.6e-31 22.5 160/162  
:HMM:PFM   251->406 PF01554 * MatE 2e-26 25.2 155/162  
:BLT:SWISS 19->439 MEPA_STAAB 1e-26 25.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82241.1 GT:GENE CPE2535 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2903647..2905014) GB:FROM 2903647 GB:TO 2905014 GB:DIRECTION - GB:GENE CPE2535 GB:PRODUCT conserved hypothetical protein GB:NOTE 455 aa, similar to gpu:AP001514_169 BH2163 gene product from Bacillus halodurans (464 aa); 32.2% identity in 423 aa overlap. 12 putative transmembrane regions were found by PSORT. GB:PROTEIN_ID BAB82241.1 LENGTH 455 SQ:AASEQ MKDQKLLGEESELKLLIKYSVPAIIGMLVNALYNIVDRIFIGHIPGVGPMAITGVGITMPIMSILLGFGMLIGIGATANISIKFGQNKRKDAEKILGNSVVLITIISLVLTIVGIVFANSILHLFGASEATIFYAKEYINVILLGTIFNLMSFSLYSTIRADGNPKMSAAVMVLGCIINVILDAVFIFVFNLGIKGAALATVISQIVTTLIMLYYYTLGGSNLKLKFETLKLDWRLVKIVLAIGVAPFSMQMAASVVQVIANNALRMYGGDLAIGAMAAISSIAMIFLMPIFGINQGSQPIIGYNYGAKKYERAQKTVKLAMIAATTILVLGGILIQAFPALVISMFNSDPKLLEIGVPGLRIYLFMMPIIGISIIGSNYFQSIGKAKLATFLSLLRQVILLIPLTLVLPKIAGLGLTGVWLAGTVSDFLSTIITGLFIIKEFKKEDSIEDEKAI GT:EXON 1|1-455:0| BL:SWS:NREP 1 BL:SWS:REP 19->439|MEPA_STAAB|1e-26|25.4|414/451| TM:NTM 12 TM:REGION 15->37| TM:REGION 53->75| TM:REGION 100->122| TM:REGION 136->157| TM:REGION 169->191| TM:REGION 196->217| TM:REGION 239->261| TM:REGION 271->293| TM:REGION 321->343| TM:REGION 355->377| TM:REGION 388->410| TM:REGION 419->441| SEG 5->18|kllgeeselkllik| SEG 61->75|imsillgfgmligig| SEG 99->116|svvlitiislvltivgiv| SEG 273->286|aigamaaissiami| SEG 370->378|iigisiigs| SEG 399->410|villipltlvlp| RP:PFM:NREP 2 RP:PFM:REP 22->183|PF01554|9e-09|26.4|159/161|MatE| RP:PFM:REP 289->396|PF01554|1e-07|25.0|108/161|MatE| HM:PFM:NREP 2 HM:PFM:REP 22->184|PF01554|1.6e-31|22.5|160/162|MatE| HM:PFM:REP 251->406|PF01554|2e-26|25.2|155/162|MatE| GO:PFM:NREP 10 GO:PFM GO:0006855|"GO:drug transmembrane transport"|PF01554|IPR002528| GO:PFM GO:0015238|"GO:drug transmembrane transporter activity"|PF01554|IPR002528| GO:PFM GO:0015297|"GO:antiporter activity"|PF01554|IPR002528| GO:PFM GO:0016020|"GO:membrane"|PF01554|IPR002528| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01554|IPR002528| GO:PFM GO:0006855|"GO:drug transmembrane transport"|PF01554|IPR002528| GO:PFM GO:0015238|"GO:drug transmembrane transporter activity"|PF01554|IPR002528| GO:PFM GO:0015297|"GO:antiporter activity"|PF01554|IPR002528| GO:PFM GO:0016020|"GO:membrane"|PF01554|IPR002528| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01554|IPR002528| OP:NHOMO 887 OP:NHOMOORG 351 OP:PATTERN --1-2------------------12112132-53-11-3343411122-2635-3433234------- --1---------------------------------------------1---------------1------2---3231273-1-11155641832-----2-221---2--------------------1---11--------2-2-----------------------1------------------11-111111122322222222322-22241--1123555554-3-111111111111111--11113-11-2-1-22221122---1333---2-11-222222222222211111-1112111-221112223-966B999999AD9B2E669998E63471GB--55---345-1121--54-------------1-1----------------------------------11111-1-1--1-----1--------11111111-111---------------------------------1-------------------------------------------------------------1---------------11-1----------1-111-1-1-----32--111-1-11-1111111111-1-----33-12-112121222312423332321333----1--------1--1------1-11--------------------------------------------------------------------------------------3---1---------------------------------------------------2262222243433----1------------E11----111112126-1-----------2-------------3223223222--2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 451-455| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //