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Clostridium perfringens str. 13 (cper0)
Gene : CPE2568
DDBJ      :CPE2568      probable glutamate racemase
Swiss-Prot:MURI_CLOPE   RecName: Full=Glutamate racemase;         EC=5.1.1.3;

Homologs  Archaea  1/68 : Bacteria  779/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.78.2
:260 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->223 2jfvA PDBj 3e-41 34.3 %
:RPS:PDB   6->223 2dwuA PDBj 8e-40 34.1 %
:RPS:SCOP  9->109 1b73A1  c.78.2.1 * 5e-13 40.0 %
:RPS:SCOP  100->210 1iu9A  c.78.2.1 * 1e-16 21.9 %
:HMM:SCOP  8->112 1b74A1 c.78.2.1 * 9.1e-37 51.0 %
:HMM:SCOP  113->261 1b74A2 c.78.2.1 * 2.9e-30 35.5 %
:RPS:PFM   10->217 PF01177 * Asp_Glu_race 3e-25 41.1 %
:HMM:PFM   10->219 PF01177 * Asp_Glu_race 1.1e-43 33.7 196/217  
:BLT:SWISS 1->242 MURI_CLOPE e-131 100.0 %
:PROS 74->82|PS00923|ASP_GLU_RACEMASE_1
:PROS 184->194|PS00924|ASP_GLU_RACEMASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82274.1 GT:GENE CPE2568 GT:PRODUCT probable glutamate racemase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2939866..2940648) GB:FROM 2939866 GB:TO 2940648 GB:DIRECTION - GB:GENE CPE2568 GB:PRODUCT probable glutamate racemase GB:NOTE 260 aa, similar to pir:G83062 glutamate racemase PA4662 from Pseudomonas aeruginosa (strain PAO1) (265 aa); 44.3% identity in 219 aa overlap GB:PROTEIN_ID BAB82274.1 LENGTH 260 SQ:AASEQ MQDDLKNAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLSFNAIEFLIKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATLTQEKFKNLMDKYGEHREVIPLPCPGLVEFIEAGDLEGEDVKNFLREKLNPYMDREISSIVLGCTHYPFVKDVIQDLVGEKVDIIDGSSGTIRELKRRLEENNMESESKKKGNLDIFNSLEDKKILELSKKLIEIK GT:EXON 1|1-260:0| SW:ID MURI_CLOPE SW:DE RecName: Full=Glutamate racemase; EC=5.1.1.3; SW:GN Name=murI; OrderedLocusNames=CPE2568; SW:KW Cell shape; Cell wall biogenesis/degradation; Complete proteome;Isomerase; Peptidoglycan synthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->242|MURI_CLOPE|e-131|100.0|242/260| GO:SWS:NREP 4 GO:SWS GO:0008360|"GO:regulation of cell shape"|Cell shape| GO:SWS GO:0007047|"GO:cellular cell wall organization"|Cell wall biogenesis/degradation| GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0009252|"GO:peptidoglycan biosynthetic process"|Peptidoglycan synthesis| PROS 74->82|PS00923|ASP_GLU_RACEMASE_1|PDOC00714| PROS 184->194|PS00924|ASP_GLU_RACEMASE_2|PDOC00714| SEG 224->235|eennmeseskkk| SEG 243->259|sledkkilelskkliei| BL:PDB:NREP 1 BL:PDB:REP 7->223|2jfvA|3e-41|34.3|216/270| RP:PDB:NREP 1 RP:PDB:REP 6->223|2dwuA|8e-40|34.1|217/265| RP:PFM:NREP 1 RP:PFM:REP 10->217|PF01177|3e-25|41.1|202/211|Asp_Glu_race| HM:PFM:NREP 1 HM:PFM:REP 10->219|PF01177|1.1e-43|33.7|196/217|Asp_Glu_race| RP:SCP:NREP 2 RP:SCP:REP 9->109|1b73A1|5e-13|40.0|100/105|c.78.2.1| RP:SCP:REP 100->210|1iu9A|1e-16|21.9|105/111|c.78.2.1| HM:SCP:REP 8->112|1b74A1|9.1e-37|51.0|104/0|c.78.2.1|1/1|Aspartate/glutamate racemase| HM:SCP:REP 113->261|1b74A2|2.9e-30|35.5|138/147|c.78.2.1|1/1|Aspartate/glutamate racemase| OP:NHOMO 822 OP:NHOMOORG 783 OP:PATTERN -------------------------------------------------------------------1 1111111111111111111-111111111111111111-1111111111111111112--1-111111-1111111111111111111111111111--111111121-2--------------111111111111111-1---1-1111111111111111111111111111111111111111111111112222222111221121111122111111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111111111111111211-111131-11-1-111111111111111111111111111111112-1111111111111111111111111111-111111111111111111--11121-------------------------------11111-----1111111111111111111-11111111111111111111111111111111111111111111111111111111-1111111111111111111121111-1111111111111111111111111--111-1111111111111211122111-1----1--11111111111111111111-11111211111111111111111111111111111111111111111212111111111111111-1111111111111111111111111111111122222211111111111111112111111111111111-11111111111111----------------111111111111111111--------------------------11111-1----1- --------------------------------------------------------------------------------------------------------------------------------------------------------------2----2------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 218 STR:RPRED 83.8 SQ:SECSTR #####cccEEEEEEcccTTHHHHHHHHHHcTTccEEEEEcGGGcccTTccHHHHHHHHHHHHHHHTTccEEEEEEccHHHHHHHHHHHHHHcHcccEEEHHHHHHHHHHHccccEEEEEEcHHHHHTTHHHHHHHHHcTTcEEEEEEcTTHHHHHHHcTTcHHHHHHHHHHHHHHHHTccccEEEEccTTGGGGHHHHHHHHcTTcEEEEHHHHHHHHHHHHH##################################### DISOP:02AL 1-5, 228-233| PSIPRED cccccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHccccEEEcHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHccccccEEccHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHccc //