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Clostridium perfringens str. 13 (cper0)
Gene : CPE2625
DDBJ      :CPE2625      probable tagatose-6-phosphate aldose/ketose isomerase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  134/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.80.1
:390 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->388 3i0zA PDBj 2e-82 44.8 %
:RPS:PDB   18->388 3c3jE PDBj 2e-41 33.6 %
:RPS:SCOP  19->371 1jxaA1  c.80.1.1 * 1e-33 21.3 %
:HMM:SCOP  18->379 1j5xA_ c.80.1.1 * 3e-56 27.4 %
:HMM:PFM   53->191 PF01380 * SIS 3.3e-16 27.8 126/131  
:HMM:PFM   229->296 PF01380 * SIS 5.1e-09 33.8 65/131  
:BLT:SWISS 17->390 AGAS_STRCO 3e-77 41.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82331.1 GT:GENE CPE2625 GT:PRODUCT probable tagatose-6-phosphate aldose/ketose isomerase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 3000370..3001542 GB:FROM 3000370 GB:TO 3001542 GB:DIRECTION + GB:GENE CPE2625 GB:PRODUCT probable tagatose-6-phosphate aldose/ketose isomerase GB:NOTE 390 aa, similar to sp:AGAS_STRCO PUTATIVE TAGATOSE-6-PHOSPHATE KETOSE/ALDOSE ISOMERASE (EC 5.-.-.-) from Streptomyces coelicolor (385 aa); 41.2% identity in 374 aa overlap. 1 putative transmembrane region was found by PSORT GB:PROTEIN_ID BAB82331.1 LENGTH 390 SQ:AASEQ MNKIFGFTQEELSSLKATYTANEIYQQPELWRETLNIVENNKDAINKFLEKNLNKDNVRIILTGAGTSAYVGDTIYLYLAKKLGKRVEAIATTDFVSNPDEYIDENANTILVSYARSGNSPESVGTYDLFEKKVKNLAHIVVTCNKEGELAKKSQEKEGNLVLLMPEKSNDKSFAMTSSFTCMTLATLLLFDIANLEENKKIVEELATKGQASLDNQWKDAKAISDLGAERIVYVGSGALKGLCHEMALKNLELTSGKQVTVCESILGFRHGPKSIINNNTLVIFLCSTNDYTALYDYDLIKEVYNDEGTQKVAVLNYFDRENLKEISHKYITANGSKLDDTFIAFNYIIFGQMISFFNSLRLGISPDNPRPDGTVNRVVQGVIIHEYNN GT:EXON 1|1-390:0| BL:SWS:NREP 1 BL:SWS:REP 17->390|AGAS_STRCO|3e-77|41.4|370/385| BL:PDB:NREP 1 BL:PDB:REP 7->388|3i0zA|2e-82|44.8|373/383| RP:PDB:NREP 1 RP:PDB:REP 18->388|3c3jE|2e-41|33.6|348/360| HM:PFM:NREP 2 HM:PFM:REP 53->191|PF01380|3.3e-16|27.8|126/131|SIS| HM:PFM:REP 229->296|PF01380|5.1e-09|33.8|65/131|SIS| RP:SCP:NREP 1 RP:SCP:REP 19->371|1jxaA1|1e-33|21.3|334/368|c.80.1.1| HM:SCP:REP 18->379|1j5xA_|3e-56|27.4|328/329|c.80.1.1|1/1|SIS domain| OP:NHOMO 139 OP:NHOMOORG 136 OP:PATTERN ---------------------------------1------------------------1--------- 11-----------------------1------------------------------------------1---------1----------------------------11-------------------------------------------------------------------------------1-----------11--1---1------------1-------------------------------1----1--1-1----11--1---------11111--111111111111111111111111111---1111----1-------1-1-1--1111---1-2------------------------1-----------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------1----------1-------111---------------------1---11-1112121111-1111111111111111111-----111-1--------------1----------11111111111-----------------------------1-------------------------------------------111--------1111-----------------------------------------------------------1---111-1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 97.9 SQ:SECSTR ######ccHHHHHHTTccHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTcEEEEEccTHHHHHHHHHHHHHHHHHHccEEEEccHHHHHHcGGTccTTccEEEEEEEcccccHHHHHHHHHHHHHcccEEEccEEccTTcHHHHHHHHHcTTcccEEcGGGcccccccHHHHHHHHHHHHHcTTTccTTHHHHHHHHHHHHHHHHHHHTTTcTTccccccccEEEEEEcTTHHHHHHHHHHHHHHHTTTccEEEEEcHHHHTTTGGGGccTTEEEEEEccccHHHHHHHHHHHHHHHHHccHHHTccEEEEEEccccHHHHTccEEEccccccccHHHHHHHHHHHHHHHHHHHHTccTTcccTcccccccccccccccc## DISOP:02AL 1-4| PSIPRED cccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEccHHHccccccccccccEEEEEEEcccccHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHcccccEEEEccccccHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHHccHHHHccHHHHHcccccEEEccccEEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEEEcccc //