Clostridium perfringens str. 13 (cper0)
Gene : adhE.2
DDBJ :adhE aldehyde-alcohol dehydrogenase E
Swiss-Prot:
Homologs Archaea 43/68 : Bacteria 635/915 : Eukaryota 157/199 : Viruses 0/175 --->[See Alignment]
c.82.1
e.22.1
:865 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 13->404 2opxA PDBj 3e-13 24.9 %
:BLT:PDB 456->858 2bi4A PDBj 7e-64 38.5 %
:RPS:PDB 5->455 1ad3A PDBj 1e-58 14.7 %
:RPS:PDB 452->858 2bi4A PDBj 5e-83 38.0 %
:RPS:SCOP 5->455 1ad3A c.82.1.1 * 1e-59 14.7 %
:RPS:SCOP 455->860 1rrmA e.22.1.2 * e-111 36.9 %
:HMM:SCOP 5->451 1bi9A_ c.82.1.1 * 2.4e-81 23.9 %
:HMM:SCOP 444->867 1vljA_ e.22.1.2 * 2.8e-129 44.5 %
:RPS:PFM 17->424 PF00171 * Aldedh 7e-25 29.9 %
:RPS:PFM 457->843 PF00465 * Fe-ADH 2e-90 51.4 %
:HMM:PFM 455->846 PF00465 * Fe-ADH 2.2e-120 45.8 360/365
:HMM:PFM 14->268 PF00171 * Aldedh 4.7e-25 26.0 250/462
:BLT:SWISS 1->859 ADHE_CLOAB 0.0 66.5 %
:PROS 718->738|PS00060|ADH_IRON_2
:PROS 630->658|PS00913|ADH_IRON_1
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82237.1
GT:GENE adhE.2
GT:PRODUCT aldehyde-alcohol dehydrogenase E
GT:DATABASE GIB00075CH01
GT:ORG cper0
GB:ACCESSION GIB00075CH01
GB:LOCATION complement(2899180..2901777)
GB:FROM 2899180
GB:TO 2901777
GB:DIRECTION -
GB:GENE adhE
GB:PRODUCT aldehyde-alcohol dehydrogenase E
GB:NOTE 865 aa, similar to pir:A49346 aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) / alcohol dehydrogenase (EC 1.1.1.1) E from Clostridium acetobutylicum (862 aa); 67.3% identity in 859 aa overlap. 1 putative transmembrane region was found by PSORT CPE2531
GB:PROTEIN_ID BAB82237.1
LENGTH 865
SQ:AASEQ MKVTNVDELMLRLEKVRAAQKEFSKFSQEQVDEIFRQAAVAANNERIRLAKMAVEESGMGIVEDKVIKNHFAAEYIYNKYKDEKTCGVIEKDESFGITKIAEPIGVVAAIVPTTNPTSTAIFKALISLKTRNAVFFSPHPRAKNSTIEAARVVLEAAVKAGAPKDIIGWIDEPSVEMSQVLMAEADIILATGGPGMVKAAYSSGKPAIGVGAGNTPAIIDETAHLKMAVNSILLSKTFDNGVICASEQTVLVVDKVYDEVRKEFADRGAYFLKDKEIDKVRKTILINGNLNANIVGQSAWKIADMAGVKVPKDTKVLIGEVESVELEEPFSHEKLSPVLGMYRVANFEEALVKAERLVELGGFGHTSVLYTDTMKSQDRVQKFGATMKTGRTIINMPSTQGAIGDIYNFKLAPSLTLGCGSWGGNSVSENVGPKHLMNVKSVAERRENMLWFRVPEKVYFKYGALGVALRELKDLNKKKVFIVTDNVLASLGYVDKITSVLEEIGVDFRVFSEVTPDPTLACAKKGAEAMRSYQPDAIIALGGGSPMDAAKIMWVMYEHPEVAFEDLAMRFMDIRKRVYPFPTMGQKAMMISVPTSAGTGSEVTPFAVITDEESGVKYPLADYELTPDMAIIDAELMMNMPKGLTAASGIDALTHALEAYVSVLASEYTNGLALEAIRLIFKYLPQAYAEGTTNIKAREKMAHASTMAGMAFANAFLGVCHSMAHKLGSEHHIAHGVANGILIDHVIRFNAVDNPRKQAAFPQYKYPNAKWRYAVIADYLGLGGKNEEEKVNNLIKAIDNLKKTVGIPATIADCGVSKESFYATLEKMSEDAFDDQCTGANPRYPLISEIKQMYINAFEGKKDRV
GT:EXON 1|1-865:0|
BL:SWS:NREP 1
BL:SWS:REP 1->859|ADHE_CLOAB|0.0|66.5|859/862|
PROS 718->738|PS00060|ADH_IRON_2|PDOC00059|
PROS 630->658|PS00913|ADH_IRON_1|PDOC00059|
BL:PDB:NREP 2
BL:PDB:REP 13->404|2opxA|3e-13|24.9|374/477|
BL:PDB:REP 456->858|2bi4A|7e-64|38.5|374/382|
RP:PDB:NREP 2
RP:PDB:REP 5->455|1ad3A|1e-58|14.7|428/446|
RP:PDB:REP 452->858|2bi4A|5e-83|38.0|376/382|
RP:PFM:NREP 2
RP:PFM:REP 17->424|PF00171|7e-25|29.9|385/440|Aldedh|
RP:PFM:REP 457->843|PF00465|2e-90|51.4|356/364|Fe-ADH|
HM:PFM:NREP 2
HM:PFM:REP 455->846|PF00465|2.2e-120|45.8|360/365|Fe-ADH|
HM:PFM:REP 14->268|PF00171|4.7e-25|26.0|250/462|Aldedh|
GO:PFM:NREP 6
GO:PFM GO:0008152|"GO:metabolic process"|PF00171|IPR015590|
GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00171|IPR015590|
GO:PFM GO:0055114|"GO:oxidation reduction"|PF00171|IPR015590|
GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00465|IPR001670|
GO:PFM GO:0046872|"GO:metal ion binding"|PF00465|IPR001670|
GO:PFM GO:0055114|"GO:oxidation reduction"|PF00465|IPR001670|
RP:SCP:NREP 2
RP:SCP:REP 5->455|1ad3A|1e-59|14.7|428/446|c.82.1.1|
RP:SCP:REP 455->860|1rrmA|e-111|36.9|377/385|e.22.1.2|
HM:SCP:REP 5->451|1bi9A_|2.4e-81|23.9|419/499|c.82.1.1|1/1|ALDH-like|
HM:SCP:REP 444->867|1vljA_|2.8e-129|44.5|393/0|e.22.1.2|1/1|Dehydroquinate synthase-like|
OP:NHOMO 2632
OP:NHOMOORG 835
OP:PATTERN 11111--1112112211----1-31-----1---11-11---211-11--111-1211221132--12 -24----2222----------2--17-----1622226A9-1-1----1---232-------52-131---2111232313232112132241122-----11-12---1---------------2233212222222222111122-21--111-----11---11112--------------1---453545222223334444343837685443463653476666741322111111122211223-2414133121-1334422311113111111122211122222222222-21121211222131155111122679G7777777D7D49KK6AB8A84123653288599132427425234-121--------1-212--12622411111111112-126-14-2321-5773324844335-112-253133321212222223--1--13-----------------------------1-2312-54143345533111144531222326145752-1132131112244261111--121-------1--11--843F55966B666-4445218E5----221--112211-11-----------1-----74A43-223-32222245732244443454-----1-------A567351777A7AAA97-77777A97677A9777778ADB463359978898888888888456344471-434345434444---------1111-2326333415--------244445443432133342524765423333---111-1-133264444454545-----------------411--11--------1-1------------------1------3233442344-22 --2211--21-4--1243333342422112333333222222211122234594231211111---2-2-22---111112-----21--22442411112-3111-27122221231-1211112-1-371-23111-12-111111111-11-2211251-31-11127113--332G1212-----4-11122211 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 861
STR:RPRED 99.5
SQ:SECSTR ####cHHHHHHHHHHHHHHHHTTGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHTHHHHHHHHHHHHHccEEcccccTTTTcEEEEEEEEccEEEEEcccccTTHHHHHHHHHHHHTTcEEEEEcccTTHHHHHHHHHHHHHHHHHHHccTTTEEEccccHHHHHHHTTccccEEEEEccHHHHHHHHTTTccEEEEcccccEEEEcccccHHHHHHHHHHHHHTTTTccTTcccEEEEcGGGHHHHHHHHHHHHHHHHcccGGGcTTccccccHHHHHHHHHTTTTccEEEcccEETTTTEEccEEEccccTTcGGGTcccccEEcEEEcccHHHHHHHHHHHHHTcccccEEEEEccGGccHHHHHHHHTTccccEEEEccccGGGGcTTcccccTTTTcccccGGGEEccccTHHHHHHTEEEEEEEEcccEcccccccccEEEcTTGGGGHHHHHHHTTccEEEEEccHHHHHTTTTHHHHHHHHHTTcEEEEEccccccccHHHHHHHHHHHHTTTccEEEEEccHHHHHHHHHHHHHTTcGGGccccTTcEEccccccccccccccccccEEEEcccccccTTTccEEEEEccTTccEEEEEcTTccccEEEEcHHHHTTccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHTTHHHHHTTTHTcHHHHHHHHHHHHHHHHHHTTTcccHHHHTTHHHHHHHcccHHHHHHHHHHHHHHHHGGGcTTcHHHHHHHGGGGcHHHHHHHHHTTTccTccHHHHHHHHHHHHHHHHHHHTccccTTTTTccGGGHEEEEHHHHHHHHHcGGGGGccccccHHHHHHHHHHHcEEccHHH
DISOP:02AL 1-2|
PSIPRED cccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEEEEEEEccEEEEEEccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHccccccccEEEcccccHHHHHHHHccccEEEEEccHHHHHHHHHcccEEEEEccccccEEEEccccHHHHHHHHHHHHHHccccEEEcccEEEEEcHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHccEEEcccccEEcccccccccHHHHHHHccccEEEEEEEccHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHHccEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHEEEccEEEEEEccccccccHHHHHHHHHHHHccccEEEEEccHHHHHccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccEEEEccccccHHHcccEEEEEEccccEEEEEEcHHHccEEEEEcHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccc
//
[GTOP]
