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Clostridium perfringens str. 13 (cper0)
Gene : aspC.2
DDBJ      :aspC         aspartate transaminase
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  446/915 : Eukaryota  157/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:380 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   9->345 2z9vA PDBj 3e-46 33.9 %
:RPS:PDB   8->362 2bkwA PDBj 4e-30 24.7 %
:RPS:SCOP  5->362 2bkwA1  c.67.1.3 * 1e-56 26.7 %
:HMM:SCOP  2->365 2bkwA1 c.67.1.3 * 8.8e-82 33.6 %
:RPS:PFM   38->287 PF00266 * Aminotran_5 7e-08 25.2 %
:HMM:PFM   35->326 PF00266 * Aminotran_5 4.1e-29 20.5 283/371  
:BLT:SWISS 5->366 Y959_METJA 1e-54 32.9 %
:PROS 183->203|PS00595|AA_TRANSFER_CLASS_5

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80560.1 GT:GENE aspC.2 GT:PRODUCT aspartate transaminase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1044777..1045919 GB:FROM 1044777 GB:TO 1045919 GB:DIRECTION + GB:GENE aspC GB:PRODUCT aspartate transaminase GB:NOTE 380 aa, similar to gp:CPASPC_1 aspC gene product from Clostridium perfringens (160 aa); 96.9% identity in 159 aa overlap CPE0854 GB:PROTEIN_ID BAB80560.1 LENGTH 380 SQ:AASEQ MNCNKTIYTPGPTNLRENVRRARALKTTNPDVDLNFVEFYKETCDRFGEIINTKNDCYILSGEGILGLEAACASLTEKGDKVLVLDNGLYGRWFDGFVTMYGGEVTYFSGDYTKEIDVEALSKFLEKNNDFKYATVVHCDTPTGVLNPVDKICPLLKSYGILTVVDSVSAMVGEEFKVDKWQIDIALGGSQKAFSAEPGLTMVSISDDARKVMENRETPIIGFYCNLNIWKNYYKDKWFPYTMPISDIISLRIAIDNILEEGKEKVIERHRKIGEATRKAVKEYGLDLFLKNGYSNTVTAVEIPEEIGALNLRNHLNKEYNVLMSTSLDKYEDKLLRIGHMGENANIEDITYVLNTIDKALKDLGFSSEKHLDKLFIENI GT:EXON 1|1-380:0| BL:SWS:NREP 1 BL:SWS:REP 5->366|Y959_METJA|1e-54|32.9|359/385| PROS 183->203|PS00595|AA_TRANSFER_CLASS_5|PDOC00514| BL:PDB:NREP 1 BL:PDB:REP 9->345|2z9vA|3e-46|33.9|336/392| RP:PDB:NREP 1 RP:PDB:REP 8->362|2bkwA|4e-30|24.7|352/374| RP:PFM:NREP 1 RP:PFM:REP 38->287|PF00266|7e-08|25.2|242/359|Aminotran_5| HM:PFM:NREP 1 HM:PFM:REP 35->326|PF00266|4.1e-29|20.5|283/371|Aminotran_5| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00266|IPR000192| RP:SCP:NREP 1 RP:SCP:REP 5->362|2bkwA1|1e-56|26.7|352/381|c.67.1.3| HM:SCP:REP 2->365|2bkwA1|8.8e-82|33.6|357/0|c.67.1.3|1/1|PLP-dependent transferases| OP:NHOMO 948 OP:NHOMOORG 668 OP:PATTERN 1111112222222222-22221212111113221111111111111111111111111111211--11 122-----------------------------------------1-------1--1------1----1-1---------11-2111112211-1-------------------------------11111-1111------111-122212211122222222211111212222222222221121211---1222221221222112211111221---31--------32-11111111111111211111----------11----------111--------------------------------------------11-22222223222114221222-21--2-111221111112111111-121-111------1243311211111------------2232232212--111-11211123-----432111122211111111222112-1------------------------------------11-13333432222233462222125243322-1----1---1-4-1111-1------------111---1-1--1122--332-11111111-111112-11----------11111111111111--1-12--2-3-21111131111111111111---2--1--------11--1------------------------------21211---1-111111111111111-------------111-1111--1----------1-2-2---------------11111--12--111111111-1111--------------31122222222222--11111221----11-1--------------1------------1-------1------1112211111211 ----11--21-1121-111111111111111111111111111111-111111111111111111-11111111-11111111111---11111111111111211-2--4442221----12-11-11161---11-1-11111-11--1--111111111-222-12421121122-----333132122--22221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 377 STR:RPRED 99.2 SQ:SECSTR HHHcccccccccccccHHHHHTccccTTcHHHHHHHHHHHHHHHHHTTccGGGTcEEEEEEccTTHHHHHHHHHHTccccEEEEEcccHHHHHHHHHHHHTTcEEEEEccccTTccccHHHHHHHHHHccccEEEEEcEETTTTEEccHHHHHHHHHcTTcEEEEEcTTTTTTccccTTTTTccEEEEEcccTccccccEEEEEEcHHHHHHTcHHHHccccccTTcHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHTTTccEEcccccccTcccccEEEEcccHHHHHHHHHHHTTEEcccccTTTGGGEEEEccGGGTcTTcTHHHHHHHHHHHTTHHHHHHHTTcccHTc### PSIPRED cccccEEEccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHcccccEEEEEEEEccccccccccHHHHHHHHHHcccEEEEEcccccccccccHHHccccEEEEcccccccccccEEEEEEcHHHHHHHHccccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccEEEEEccccccHHHHHHHHHHHccEEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccEEEccc //