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Clostridium perfringens str. 13 (cper0)
Gene : cinA
DDBJ      :cinA         probable competence-damage inducible protein
Swiss-Prot:CINA_CLOPE   RecName: Full=Putative competence-damage inducible protein;

Homologs  Archaea  42/68 : Bacteria  777/915 : Eukaryota  65/199 : Viruses  0/175   --->[See Alignment]
c.51.5c.57.1
:412 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->80 1t3eB PDBj 1e-05 27.3 %
:BLT:PDB   270->369 2a9sB PDBj 9e-25 53.0 %
:RPS:PDB   2->160 1eavA PDBj 9e-21 20.1 %
:RPS:PDB   267->409 2a9sB PDBj 1e-51 40.6 %
:RPS:SCOP  2->83 1wu2A3  c.57.1.2 * 2e-18 24.4 %
:RPS:SCOP  267->404 2a9sA1  c.51.5.1 * 4e-49 42.0 %
:HMM:SCOP  1->207 1di6A_ c.57.1.1 * 2.1e-38 35.4 %
:HMM:SCOP  247->411 2a9sA1 c.51.5.1 * 4.2e-56 49.7 %
:RPS:PFM   5->170 PF00994 * MoCF_biosynth 2e-13 36.9 %
:RPS:PFM   267->408 PF02464 * CinA 1e-39 55.6 %
:HMM:PFM   256->408 PF02464 * CinA 3e-62 51.6 153/155  
:HMM:PFM   5->170 PF00994 * MoCF_biosynth 2.8e-38 39.4 142/144  
:BLT:SWISS 1->412 CINA_CLOPE 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB79838.1 GT:GENE cinA GT:PRODUCT probable competence-damage inducible protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 171050..172288 GB:FROM 171050 GB:TO 172288 GB:DIRECTION + GB:GENE cinA GB:PRODUCT probable competence-damage inducible protein GB:NOTE 412 aa, similar to sp:CINA_BACSU PUTATIVE COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap CPE0132 GB:PROTEIN_ID BAB79838.1 LENGTH 412 SQ:AASEQ MKAEIMAIGTEILLGDIVNTNAQFLAKELANLGIGVYHQSVVGDNSERILEAFDNAFKNCDTIITTGGLGPTKDDLSKELAAKYFNMEMCLREELLCDLEDYFKKNNLEMTENNKKQCYFPKEAIILPNPNGTAPGAILEGENNKRIILLPGPPREMEPMFTNHVVPYLSKFTDSVLVSKILRVFGIGESKMEDLVCDLLDNENPTVAPYAKNIDVILRITAKGKDKEEAEKLIAPMEKEIRKRLGDNIYGEGEVTLEEVVGKLLVDKKMTVSTAESCTGGMVASTLINYPGISEVFMEGAVTYSNEAKMKRLGVKKETLEDFGAVSEECAREMAKGIAKNAGTRIGISTTGIAGPGGGTEEKPVGLVYAGLCIDGITKVKKFNFKADRQKVRTRTMMNVLDWLRRELEKID GT:EXON 1|1-412:0| SW:ID CINA_CLOPE SW:DE RecName: Full=Putative competence-damage inducible protein; SW:GN Name=cinA; OrderedLocusNames=CPE0132; SW:KW Complete proteome. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->412|CINA_CLOPE|0.0|100.0|412/412| SEG 87->101|memclreellcdled| SEG 251->266|gegevtleevvgkllv| BL:PDB:NREP 2 BL:PDB:REP 4->80|1t3eB|1e-05|27.3|77/405| BL:PDB:REP 270->369|2a9sB|9e-25|53.0|100/165| RP:PDB:NREP 2 RP:PDB:REP 2->160|1eavA|9e-21|20.1|144/154| RP:PDB:REP 267->409|2a9sB|1e-51|40.6|143/165| RP:PFM:NREP 2 RP:PFM:REP 5->170|PF00994|2e-13|36.9|141/143|MoCF_biosynth| RP:PFM:REP 267->408|PF02464|1e-39|55.6|142/155|CinA| HM:PFM:NREP 2 HM:PFM:REP 256->408|PF02464|3e-62|51.6|153/155|CinA| HM:PFM:REP 5->170|PF00994|2.8e-38|39.4|142/144|MoCF_biosynth| GO:PFM:NREP 1 GO:PFM GO:0006777|"GO:Mo-molybdopterin cofactor biosynthetic process"|PF00994|IPR001453| RP:SCP:NREP 2 RP:SCP:REP 2->83|1wu2A3|2e-18|24.4|82/136|c.57.1.2| RP:SCP:REP 267->404|2a9sA1|4e-49|42.0|138/167|c.51.5.1| HM:SCP:REP 1->207|1di6A_|2.1e-38|35.4|181/190|c.57.1.1|1/1|Molybdenum cofactor biosynthesis proteins| HM:SCP:REP 247->411|2a9sA1|4.2e-56|49.7|165/0|c.51.5.1|1/1|CinA-like| OP:NHOMO 1157 OP:NHOMOORG 884 OP:PATTERN 1111-111111111111111111122222233----------------------11111111111--- 11111-1111111111111-1111111111111222-1111111--111--11111-1--1111-111111111111111111111111111-1111--1-111111212---------------11111111111111121112211111111111111111111111111111111111111111111-111111111111111111111111111111111111111111-11111111111111121111-1-11-1---111111--11------1111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111-111114223-2112223221211112222222222222-11211211222-222122222222122121223233222222222222221211211111111--11-----------------211121111121111112111111121111111122221-11111111111111112-111111111111111122111111121111111-11111111211112111111111111111111111111111111222111111111111111111111111111---1111------23222323332322233-3333222323322333333343221213333333333333333222233331-222222222222---111111222221111------------------------121111112212222121111-1-1111-122222222222222111111111111111-11111111--------1-1----1--11---1----1111-1111111111111111 ---------------111---112121111-111-11------111--121121--------2--1111-1--1-111111----1------11-1----1--211-1--1----1-------------------------------------------111131------1211-1------1----1-----22--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 287 STR:RPRED 69.7 SQ:SECSTR HEEEEEEEcHHHHTTcccccHHHHHHTTTTTTcEEEEEEEEEcccHHHHHHHHHHHHHcccEEEEEccccccTTccHHHHHHTTcc########EEcHHHHHHHHHHTTcGGGGccccEEEETTEEEEEc##ccHHHHHHH#####HHHHHHHHHHHHc###########################################################################################################HHTccEEEEEEccTTHHHHHHTTcTTGGGTEEEEEEcccHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHHTccccEEEEEEEccccccccccccTTEEEEEEEETTEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHc### DISOP:02AL 412-413| PSIPRED cEEEEEEEccEEEEEEEEEccHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHcccccEEccccccEEEEEEEEcccccEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEccHHHHHHHHHHHHHccccEEEEccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccEEEEEHHHcHHHHHHHHHcccccHHHcccEEEEccHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHHcccEEEEEEEEEcccccccccccEEEEEEEEEcccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHccc //