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Clostridium perfringens str. 13 (cper0)
Gene : fixB
DDBJ      :fixB         3-hydroxybutyryl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  542/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
c.26.2c.31.1
:335 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->328 1o96Z PDBj 2e-40 33.9 %
:RPS:PDB   9->328 3clsD PDBj 2e-55 30.5 %
:RPS:SCOP  8->226 1efpB  c.26.2.3 * 4e-36 17.5 %
:RPS:SCOP  206->328 1efpA2  c.31.1.2 * 2e-50 55.3 %
:HMM:SCOP  7->204 1o97D1 c.26.2.3 * 1.2e-63 45.3 %
:HMM:SCOP  207->328 1o97D2 c.31.1.2 * 1.3e-49 55.7 %
:RPS:PFM   12->170 PF01012 * ETF 1e-27 44.4 %
:RPS:PFM   208->291 PF00766 * ETF_alpha 7e-28 65.5 %
:HMM:PFM   8->170 PF01012 * ETF 5.2e-57 45.9 159/164  
:HMM:PFM   208->292 PF00766 * ETF_alpha 1.1e-41 63.5 85/86  
:BLT:SWISS 1->330 ETFA_CLOAB e-138 71.5 %
:PROS 272->298|PS00696|ETF_ALPHA

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82004.1 GT:GENE fixB GT:PRODUCT 3-hydroxybutyryl-CoA dehydrogenase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2642704..2643711) GB:FROM 2642704 GB:TO 2643711 GB:DIRECTION - GB:GENE fixB GB:PRODUCT 3-hydroxybutyryl-CoA dehydrogenase GB:NOTE 335 aa, similar to sp:FIXB_CLOAB FIXB PROTEIN from Clostridium acetobutylicum (334 aa); 73.9% identity in 329 aa overlap CPE2298 GB:PROTEIN_ID BAB82004.1 LENGTH 335 SQ:AASEQ MNKADFNGVWVFAEQREGQLQKVSLELLGEGRKIADKLGSKLTALLIGNKVQNLVEDLSRHGADEVLVVDAPELEHYTTDGYTKAICELANAKKPNIIFIGATFIGRDLGPRVAARLETGLTADCTSLDVDVESGDLLATRPAFGGNLMATIVCPDHRPQMATVRPGVFEKLPLGENDATVENVEIKFNSNDIRTKIVEIIKEHKDIVDISEANVLVAGGRGIGSEENFKMLKELAEVMNGSIAASRAAVEKGWVDKDYQVGQTGKTVRPNIYVACGISGAIQHAAGMQDSDMIIAINKDANAPIMKIADYAIVGDVNKVVPEFIAQLKAMKEEA GT:EXON 1|1-335:0| BL:SWS:NREP 1 BL:SWS:REP 1->330|ETFA_CLOAB|e-138|71.5|330/336| PROS 272->298|PS00696|ETF_ALPHA|PDOC00583| BL:PDB:NREP 1 BL:PDB:REP 9->328|1o96Z|2e-40|33.9|307/312| RP:PDB:NREP 1 RP:PDB:REP 9->328|3clsD|2e-55|30.5|315/318| RP:PFM:NREP 2 RP:PFM:REP 12->170|PF01012|1e-27|44.4|153/157|ETF| RP:PFM:REP 208->291|PF00766|7e-28|65.5|84/86|ETF_alpha| HM:PFM:NREP 2 HM:PFM:REP 8->170|PF01012|5.2e-57|45.9|159/164|ETF| HM:PFM:REP 208->292|PF00766|1.1e-41|63.5|85/86|ETF_alpha| RP:SCP:NREP 2 RP:SCP:REP 8->226|1efpB|4e-36|17.5|212/246|c.26.2.3| RP:SCP:REP 206->328|1efpA2|2e-50|55.3|123/124|c.31.1.2| HM:SCP:REP 7->204|1o97D1|1.2e-63|45.3|192/0|c.26.2.3|1/1|Adenine nucleotide alpha hydrolases-like| HM:SCP:REP 207->328|1o97D2|1.3e-49|55.7|122/0|c.31.1.2|1/1|DHS-like NAD/FAD-binding domain| OP:NHOMO 1213 OP:NHOMOORG 747 OP:PATTERN 22----2222222222-22322212112-111-----------------------------3322--- 1232211111111111111-11111111111111111122111111-11---111112--11211111121--------152------11111122---111111111-1---------------1111111112111122---12-------11-----------1----------------11111--112111111-1111111111111111111131111------21----------------------1-------------------------------------------------------------------1532555555554541433422215-3-1-12-973463-141--11-3-12-11111111132222111222221111111111112222242212113112334335232411111111111112222222212212322-----------------------------1121113321222233422222223722221245612121112261222231213111-112111111111---14115422----------7471915--11211114-------------------------1111-1112121-1111111311112132121-----1-------1-1-1--3222333332-2333333333233333331-------13231333332313113-2213222-----------------1111111111-1124---------------11111111114122222222222221223-------------1-----11-1111111111111111--12111111----------1-------------------------11111121111-- ----111-211-11111111111111111111111111111111111-111111111-1111111111--1111111111111111-1-12111111111111112-1212121111111111111-2-231-122111-1-1111111111-2122111211211121131111111-----1111321111121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 325 STR:RPRED 97.0 SQ:SECSTR #####ccEEEEEccEETTEEcTHHHHHHHHHHHHcccTTcEEEEEEEcTTGGGGHHHHccTTccEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEccHHHHTTHHHHHHHcccEEEEEEcEEEEEEETTEEEEEEEETTTTEEEEEccTTcccEEEEEcTTcccccccccccEEEEEEcccccccccccccccccccccccccTTcccEEEEEcGGGccGGGHHHHHHHHHHHTcEEEEcHHHHHTTcccGGGcccccccccTccEEEEEcccccHHHHHHHTTccEEEEEcccTTcGGGGTccEEEcccHHHHHHHHHHHcTc##### DISOP:02AL 1-3, 171-183, 333-335| PSIPRED ccHHHHccEEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHccccEEEEEccHHHccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHcccEEEEEEEEEEEEcccEEEEEEEccccEEEEEEEEccccEEEEEEcccccccccccccccEEEEEEccccccccEEEEEEEEEccccccccccccEEEEEccccccccHHHHHHHHHHHHccEEEccHHHHHcccccHHHEEccccEEEccEEEEEEEEccHHHHHHHHccccEEEEEEccccccHHHHccEEEEHHHHHHHHHHHHHHHHHHccc //