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Clostridium perfringens str. 13 (cper0)
Gene : fruR
DDBJ      :fruR         probable transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  550/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.124.1
:248 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   36->94 3by6D PDBj 2e-07 10.2 %
:RPS:PDB   65->248 3bxgA PDBj 8e-26 9.5 %
:RPS:SCOP  6->56 1lvaA4  a.4.5.35 * 2e-06 13.7 %
:RPS:SCOP  76->228 1poiB  c.124.1.3 * 1e-26 13.7 %
:HMM:SCOP  2->81 1stzA1 a.4.5.51 * 9.5e-14 41.2 %
:HMM:SCOP  73->234 1lk5A1 c.124.1.4 * 1.1e-32 30.8 %
:RPS:PFM   6->56 PF08220 * HTH_DeoR 3e-06 47.1 %
:RPS:PFM   76->223 PF00455 * DeoR 3e-30 47.3 %
:HMM:PFM   77->227 PF00455 * DeoR 4.6e-42 41.1 151/157  
:HMM:PFM   6->59 PF08220 * HTH_DeoR 1.1e-18 55.6 54/57  
:BLT:SWISS 1->246 FRUR_BACSU 1e-54 45.9 %
:PROS 6->40|PS00894|HTH_DEOR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80292.1 GT:GENE fruR GT:PRODUCT probable transcriptional regulator GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(727822..728568) GB:FROM 727822 GB:TO 728568 GB:DIRECTION - GB:GENE fruR GB:PRODUCT probable transcriptional regulator GB:NOTE 248 aa, similar to pir:B69627 transcription repressor of fructose operon fruR from Bacillus subtilis (251 aa); 48.4% identity in 246 aa overlap CPE0586 DeoR family GB:PROTEIN_ID BAB80292.1 LENGTH 248 SQ:AASEQ MLSEKRHEIILNLLKLKGFVSLTELLEATESSESTIRRDLSYLESINLLKRVHGGAKSLANVSKELSYNEKSSKSIHEKRAIAKYAASLIEDGDCIFVDAGTTTYELIDYLEGKDILVVSNGLSHIDTLIQKNIKCYVIGGNIKISTKAITGCDALMCLSKFRFDKCFIGANGVHHTYGLTTPDTEEAILKECAINNSRKAYVLADDSKFGEISTIKFSDINKCVIITNEKPKDNTYDKKTDIKVVDI GT:EXON 1|1-248:0| BL:SWS:NREP 1 BL:SWS:REP 1->246|FRUR_BACSU|1e-54|45.9|246/251| PROS 6->40|PS00894|HTH_DEOR_1|PDOC00696| SEG 21->35|sltelleatessest| RP:PDB:NREP 2 RP:PDB:REP 36->94|3by6D|2e-07|10.2|59/121| RP:PDB:REP 65->248|3bxgA|8e-26|9.5|169/247| RP:PFM:NREP 2 RP:PFM:REP 6->56|PF08220|3e-06|47.1|51/56|HTH_DeoR| RP:PFM:REP 76->223|PF00455|3e-30|47.3|148/157|DeoR| HM:PFM:NREP 2 HM:PFM:REP 77->227|PF00455|4.6e-42|41.1|151/157|DeoR| HM:PFM:REP 6->59|PF08220|1.1e-18|55.6|54/57|HTH_DeoR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF08220|IPR001034| GO:PFM GO:0005622|"GO:intracellular"|PF08220|IPR001034| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF08220|IPR001034| RP:SCP:NREP 2 RP:SCP:REP 6->56|1lvaA4|2e-06|13.7|51/60|a.4.5.35| RP:SCP:REP 76->228|1poiB|1e-26|13.7|153/260|c.124.1.3| HM:SCP:REP 2->81|1stzA1|9.5e-14|41.2|80/87|a.4.5.51|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 73->234|1lk5A1|1.1e-32|30.8|143/150|c.124.1.4|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 1981 OP:NHOMOORG 556 OP:PATTERN ------------------------2--1---------------------------------------- 33--8322334111-------3---5------322212221--1611-12216461-4--2135626555311111112---1--------1--------13--14-6-B--------------------------22211----------------------------1-------------321--22-31433333334243333375442434411123236666666A2222222222222224322342-1261-32255--771411--3422233333344444444444444444444444444434221333551177332344354413--244222-3-1121----1--1--42225222--12--------1-113---1311122222222224-1111112218--8665454767552----3225245322111111113111---3-------------------------------1---111113445432333344683333134252232--1211-1111-1323-------211111111--------2---12--1---1-------11-----1-----------------------------4392-1111122111111122211111111-------------7487553A98BABBBAA-9BAA9A9A9A9CA9AABA4AAB56432B8CBCBCBBABBABBBA887AA982-766666556666---------------115333737223225775----------2-22122432222222455----------333633333532561111111----------4---------------------1---2-1-----121-------41--13111--- -------------2------------------------------------------------------------------------------------------------------------------------------------------------1----1------4---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 248 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEEcTTccEEEEEEETTTTEEEEEETTEEEEEcTTcccGGGccccGGGccEcEEEccccccTTTcTTHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccTTccEETTTEEEEcccccGEEEEEccccccccGGGcHHHHHHHHHHHHTcEEccccccccccHcHHHHHHHHcHHHHHHHHHHHTccEEEEccEEHHHHHHHTTccHHHHHHHHHTTccEEETTEEEcTTccEE DISOP:02AL 1-4| PSIPRED ccHHHHHHHHHHHHHHcccEEHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHcccccEEEEccHHHHHHHHHcccEEEEEccEEEccccEEEcHHHHHHHHHccccEEEEEEcEEccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccEEEEEccccccEEEccccccHHHHHHHHHccccc //