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Clostridium perfringens str. 13 (cper0)
Gene : ftsH.1
DDBJ      :ftsH         cell division protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  198/199 : Viruses  2/175   --->[See Alignment]
a.269.1b.2.5c.37.1
:717 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   163->606 2ce7C PDBj e-129 56.3 %
:RPS:PDB   158->602 2dhrA PDBj 4e-93 54.2 %
:RPS:SCOP  162->230 1s9hC  c.37.1.20 * 4e-10 7.2 %
:RPS:SCOP  211->384 1a3qA2  b.2.5.3 * 8e-42 9.9 %
:RPS:SCOP  415->602 2ce7A1  a.269.1.1 * 2e-51 49.7 %
:HMM:SCOP  155->406 2ce7A2 c.37.1.20 * 3.8e-72 40.9 %
:HMM:SCOP  415->612 2di4A1 a.269.1.1 * 3.5e-67 50.8 %
:RPS:PFM   11->103 PF06480 * FtsH_ext 2e-04 27.2 %
:RPS:PFM   95->134 PF09529 * Intg_mem_TP0381 7e-04 40.0 %
:RPS:PFM   167->221 PF01078 * Mg_chelatase 4e-06 56.1 %
:RPS:PFM   203->332 PF00004 * AAA 4e-32 53.7 %
:RPS:PFM   397->601 PF01434 * Peptidase_M41 3e-53 53.5 %
:HMM:PFM   395->601 PF01434 * Peptidase_M41 3.8e-73 49.0 206/213  
:HMM:PFM   203->333 PF00004 * AAA 4.9e-48 56.7 127/130  
:HMM:PFM   11->105 PF06480 * FtsH_ext 7e-12 18.7 91/110  
:BLT:SWISS 36->602 FTSH3_SYNY3 e-148 49.9 %
:PROS 424->433|PS00142|ZINC_PROTEASE
:PROS 304->322|PS00674|AAA
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80304.1 GT:GENE ftsH.1 GT:PRODUCT cell division protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 745703..747856 GB:FROM 745703 GB:TO 747856 GB:DIRECTION + GB:GENE ftsH GB:PRODUCT cell division protein GB:NOTE 717 aa, similar to sp:FTH3_SYNY3 CELL DIVISION PROTEIN FTSH HOMOLOG 3 (EC 3.4.24.-) from Synechocystis sp. (strain PCC 6803) (628 aa); 53.1% identity in 567 aa overlap. Putative N-terminal signal sequence and 1 putative transmembrane region were found by PSORT CPE0598 GB:PROTEIN_ID BAB80304.1 LENGTH 717 SQ:AASEQ MFKDKKMLKYIVIYSIIAFGILLTFNMVKDEMLYEKVDYSTFMQMLDKKEVKSVNFSGNQIEITPSDSSNLKGKILYTTNPAVAGITQPDLIKDLTAAGVGFNVTKPENYQLLGLLMSWVFPLILIFFVGRMMFSKMNNKMGGGVMSFGKNNAKLYAENETGITFKDVAGQDEAKESLVEIVDFLHDTRKYVEIGAKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSMSGSDFVEMFVGMGAARVRDLFKQAEEKAPCIVFIDEIDAIGKSRDGAIQGNDEREQTLNQLLTEMDGFDSSKGVVILAATNRPEVLDKALLRPGRFDRRIIVDRPDLIGREEILKVHSRDVKLSDDVSLEEIAKSTPGAVGADLANIVNEAALRAVKHGRKFVIQEDLDEAVEVIIAGQEKRDRILSPKEKKIVAYHEVGHALVAALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKYLVSKEEMIDQISVMLGGRAAEEVVFNSITTGASNDIERATQSARNMITIYGMSERFDMMALEAMSNRYLDGRPVRNCSETTAAIADEEVLQVIKKAHEKSIKILIENRELLDEITGVLLDKETIMGDEFMEIVYSKYPEKREADEKAKKEIQSLREQALAKRKEKEEAIKKAREEALRLEEEQRKQAELKAMIEAQEEAAKLARANNEANNDDLDSSKENEEVKSNVNDRATEEKKDDSSTNNKVDGE GT:EXON 1|1-717:0| BL:SWS:NREP 1 BL:SWS:REP 36->602|FTSH3_SYNY3|e-148|49.9|567/628| PROS 424->433|PS00142|ZINC_PROTEASE|PDOC00129| PROS 304->322|PS00674|AAA|PDOC00572| COIL:NAA 67 COIL:NSEG 1 COIL:REGION 611->677| TM:NTM 2 TM:REGION 7->29| TM:REGION 112->134| SEG 608->619|ekreadekakke| SEG 627->655|alakrkekeeaikkareealrleeeqrkq| BL:PDB:NREP 1 BL:PDB:REP 163->606|2ce7C|e-129|56.3|412/421| RP:PDB:NREP 1 RP:PDB:REP 158->602|2dhrA|4e-93|54.2|443/458| RP:PFM:NREP 5 RP:PFM:REP 11->103|PF06480|2e-04|27.2|92/99|FtsH_ext| RP:PFM:REP 95->134|PF09529|7e-04|40.0|40/224|Intg_mem_TP0381| RP:PFM:REP 167->221|PF01078|4e-06|56.1|41/200|Mg_chelatase| RP:PFM:REP 203->332|PF00004|4e-32|53.7|121/123|AAA| RP:PFM:REP 397->601|PF01434|3e-53|53.5|202/206|Peptidase_M41| HM:PFM:NREP 3 HM:PFM:REP 395->601|PF01434|3.8e-73|49.0|206/213|Peptidase_M41| HM:PFM:REP 203->333|PF00004|4.9e-48|56.7|127/130|AAA| HM:PFM:REP 11->105|PF06480|7e-12|18.7|91/110|FtsH_ext| GO:PFM:NREP 11 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF06480|IPR011546| GO:PFM GO:0005524|"GO:ATP binding"|PF06480|IPR011546| GO:PFM GO:0008270|"GO:zinc ion binding"|PF06480|IPR011546| GO:PFM GO:0016021|"GO:integral to membrane"|PF06480|IPR011546| GO:PFM GO:0015979|"GO:photosynthesis"|PF01078|IPR000523| GO:PFM GO:0015995|"GO:chlorophyll biosynthetic process"|PF01078|IPR000523| GO:PFM GO:0016851|"GO:magnesium chelatase activity"|PF01078|IPR000523| GO:PFM GO:0005524|"GO:ATP binding"|PF00004|IPR003959| GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF01434|IPR000642| GO:PFM GO:0005524|"GO:ATP binding"|PF01434|IPR000642| GO:PFM GO:0006508|"GO:proteolysis"|PF01434|IPR000642| RP:SCP:NREP 3 RP:SCP:REP 162->230|1s9hC|4e-10|7.2|69/199|c.37.1.20| RP:SCP:REP 211->384|1a3qA2|8e-42|9.9|171/184|b.2.5.3| RP:SCP:REP 415->602|2ce7A1|2e-51|49.7|161/162|a.269.1.1| HM:SCP:REP 155->406|2ce7A2|3.8e-72|40.9|252/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 415->612|2di4A1|3.5e-67|50.8|197/0|a.269.1.1|1/1|FtsH protease domain-like|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cKKJJKMLJHJJLJIJILJKKMMPNIMQKMKKLKKKLKLDKMKKKKKLAKMLKJKKKLL-PhNOPPLKIJKIHHRUWBQ*WmfhZfclSOQJQTSifLzL**c2dYtLMLIXKRWMLRMQJTOLbNcSVUQiaSSSXOeRSsTaSPOYcY*XVWaY*v**L*yYaZZUXk -----------------------------------------------------------------------------------------------1--------------------------------------------------------------------------1---- DISOP:02AL 1-4, 30-36, 135-162, 271-287, 407-418, 608-717| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHcccEEEEEEEccEEEEEEcccccccccEEEEEEccccccccHHHHHHHHHccccEEEEcccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHHcccHHHHHccccccccEEEEccccccHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHccccccccccHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHcccccccEEEcccccHHHHHHHHHHHHccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHccHHccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccHHccccccccc //