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Clostridium perfringens str. 13 (cper0)
Gene : gapC
DDBJ      :gapC         glyceraldehyde-3-phosphate dehydrogenas
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  892/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.81.1
:332 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->331 3gnqB PDBj 4e-99 59.0 %
:RPS:PDB   2->332 1cerO PDBj 2e-93 51.5 %
:RPS:SCOP  1->177 1a7kA1  c.2.1.3 * 1e-43 38.9 %
:RPS:SCOP  150->313 1a7kA2  d.81.1.1 * 1e-44 43.6 %
:HMM:SCOP  2->167 1cerO1 c.2.1.3 * 4.2e-67 54.5 %
:HMM:SCOP  150->313 2b4rO2 d.81.1.1 * 6e-71 59.0 %
:RPS:PFM   3->150 PF00044 * Gp_dh_N 9e-53 64.9 %
:RPS:PFM   155->311 PF02800 * Gp_dh_C 6e-45 59.9 %
:HMM:PFM   155->312 PF02800 * Gp_dh_C 7.2e-65 59.5 153/157  
:HMM:PFM   2->150 PF00044 * Gp_dh_N 3.1e-62 61.1 149/151  
:BLT:SWISS 1->327 G3P_CLOPA e-145 76.5 %
:PROS 148->155|PS00071|GAPDH

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81010.1 GT:GENE gapC GT:PRODUCT glyceraldehyde-3-phosphate dehydrogenas GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1543708..1544706) GB:FROM 1543708 GB:TO 1544706 GB:DIRECTION - GB:GENE gapC GB:PRODUCT glyceraldehyde-3-phosphate dehydrogenas GB:NOTE 332 aa, similar to gp:AF043386_2 glyceraldehyde-3-phosphate dehydrogenase from Clostridium acetobutylicum (334 aa); 78.8% identity in 326 aa overlap. (EC 1.2.1.12) CPE1304 GB:PROTEIN_ID BAB81010.1 LENGTH 332 SQ:AASEQ MVKVAINGFGRIGRLALRLMIDNPEFEVVAINDLTDAKTLAHLFKYDSAQGRFNGEIEVKEGAFVVNGKEIKVTAKSNPAELPWGELGVDVVLECTGFFASKEKASAHLTAGAKKVVISAPAGNDLPTVVYNVNHDILDGSEDVISGASCTTNCLAPMAKALNDNFGLNKGFMTTIHAYTNDQNTLDAPHKKGDLRRARAAAANIVPNSTGAAKAIGLVIPELAGKLDGNAQRVPVITGSLTELVCTLDKKVTVEEVNAAMKAASNESFGYTEDPIVSSDVIGISFGSLFDATQTKIMEVDGQQLVKVASWYDNEASYTNQLIRTLKCLVSK GT:EXON 1|1-332:0| BL:SWS:NREP 1 BL:SWS:REP 1->327|G3P_CLOPA|e-145|76.5|327/334| PROS 148->155|PS00071|GAPDH|PDOC00069| BL:PDB:NREP 1 BL:PDB:REP 2->331|3gnqB|4e-99|59.0|324/334| RP:PDB:NREP 1 RP:PDB:REP 2->332|1cerO|2e-93|51.5|324/331| RP:PFM:NREP 2 RP:PFM:REP 3->150|PF00044|9e-53|64.9|148/148|Gp_dh_N| RP:PFM:REP 155->311|PF02800|6e-45|59.9|152/156|Gp_dh_C| HM:PFM:NREP 2 HM:PFM:REP 155->312|PF02800|7.2e-65|59.5|153/157|Gp_dh_C| HM:PFM:REP 2->150|PF00044|3.1e-62|61.1|149/151|Gp_dh_N| GO:PFM:NREP 8 GO:PFM GO:0004365|"GO:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity"|PF00044|IPR000173| GO:PFM GO:0006006|"GO:glucose metabolic process"|PF00044|IPR000173| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF00044|IPR000173| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00044|IPR000173| GO:PFM GO:0004365|"GO:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity"|PF02800|IPR000173| GO:PFM GO:0006006|"GO:glucose metabolic process"|PF02800|IPR000173| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF02800|IPR000173| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02800|IPR000173| RP:SCP:NREP 2 RP:SCP:REP 1->177|1a7kA1|1e-43|38.9|167/189|c.2.1.3| RP:SCP:REP 150->313|1a7kA2|1e-44|43.6|163/169|d.81.1.1| HM:SCP:REP 2->167|1cerO1|4.2e-67|54.5|165/170|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 150->313|2b4rO2|6e-71|59.0|161/0|d.81.1.1|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| OP:NHOMO 2337 OP:NHOMOORG 1090 OP:PATTERN ----------------1-------1--1111------------1--------------------1--- 1111222222221211111-111111111111111111221121121211112222221111211212321111111111111111111111111111111333322113111111111111111111111111112223311121222322233332222322232332322222122122111111111122222222222222222222222222222222211111124222222222222222222222111121111111-1111111112221111111112111111111111111111111111111111111112311222222212112221111211112113333222112111111111121111111111111121111112111111111111-1111111111111111111111111211143233223441111111111111111111111111111-------------111111111111111111111111111111111111111213211111131111212111121112212222222121223114332222222222232221432111111132111111111122222222212223113323314344446444444544444445441-1131211111143322322333233333-332333332333333233344322222232223222322222233324233112222222222221111111111111135441111111111111112222222222313333333353334433311111111133334444444444411111111111111113111111111111111111111-1-1111121111111112---1111111111111 1111111-74421121111233432321111111111111111111211211111111111113113221232135333411111162-111121822211112341162227224322112B1V*2H2By2-32N1222Y22A3-21214--A23122--22211251-744313345*33343G7OB1756559652 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 332 STR:RPRED 100.0 SQ:SECSTR ccEEEEEcccHHHHHHHHHHHHHTccEEEEEEccccHHHHHHHHHccTTTccccccEEEcccEEEETTEEEEEEccccGGGccHHHHTEEEEEEcccccccHHHHHTTGGGTccEEEEccccccccEEccTTTcGGGccTTTccEEEccHHHHHHHHHHHHHHHHTcEEEEEEEEEEEccTTccccccccccccTTTTccTTcccEEEcccHHHHHTTTcGGGTTcEEEEEEEEcccccEEEEEEEEEcccccHHHHHHHHHHHHTTTEEEEcccccHHHHTTccccEEEEGGGcEEETccccTEEEEEEEEcTTHHHHHHHHHHHHHHHHT PSIPRED cEEEEEccccHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHcccccccccEEEEEccEEEEccEEEEEEEcccHHcccHHHHcccEEEEcccccccHHHHHHHHcccccEEEEEccccccccEEEEcccHHHccccccEEEcccccccccccHHHHHccccccccccEEEEEEccccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEccccccEEEEEEEEcccccHHHHHHHHHHHHcccccccccccEEEEEEcccEEEEEEcccEEEEEcccccEEEEEEEEcccccHHHHHHHHHHHHHcc //