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Clostridium perfringens str. 13 (cper0)
Gene : hemA
DDBJ      :hemA         glutamyl-tRNA reductase
Swiss-Prot:HEM1_CLOPE   RecName: Full=Glutamyl-tRNA reductase;         Short=GluTR;         EC=1.2.1.70;

Homologs  Archaea  36/68 : Bacteria  579/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.58.39
:400 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->70 1yb3A PDBj 8e-04 30.6 %
:BLT:PDB   41->279 1gpjA PDBj 3e-20 32.0 %
:RPS:PDB   90->218 2eggB PDBj 7e-06 10.3 %
:RPS:SCOP  2->152 1gpjA3  d.58.39.1 * 7e-34 25.9 %
:RPS:SCOP  173->279 1omoA  c.2.1.13 * 1e-07 16.8 %
:HMM:SCOP  1->152 1gpjA3 d.58.39.1 * 9.4e-35 34.3 %
:HMM:SCOP  173->300 1gpjA2 c.2.1.7 * 6.6e-18 23.4 %
:RPS:PFM   5->149 PF05201 * GlutR_N 1e-20 36.6 %
:RPS:PFM   308->398 PF00745 * GlutR_dimer 2e-04 30.8 %
:HMM:PFM   8->150 PF05201 * GlutR_N 2.8e-41 34.8 141/152  
:HMM:PFM   172->289 PF01488 * Shikimate_DH 7.3e-26 33.9 118/135  
:HMM:PFM   306->398 PF00745 * GlutR_dimer 1.1e-08 25.8 93/101  
:BLT:SWISS 1->400 HEM1_CLOPE 0.0 100.0 %
:PROS 93->116|PS00747|GLUTR
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81143.1 GT:GENE hemA GT:PRODUCT glutamyl-tRNA reductase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1694559..1695761) GB:FROM 1694559 GB:TO 1695761 GB:DIRECTION - GB:GENE hemA GB:PRODUCT glutamyl-tRNA reductase GB:NOTE 400 aa, similar to sp:HEM1_CLOPE GLUTAMYL-TRNA REDUCTASE (EC 1.2.1.-) (GLUTR) from Clostridium perfringens (400 aa); 91% identity in 400 aa overlap CPE1437 GB:PROTEIN_ID BAB81143.1 LENGTH 400 SQ:AASEQ MIGVIGVKRNVDIAIREKLALYPKKHKKYVGELLNSFKEVVILNTCNRTEIYFNCTEEISEDEIFDKIFNVFNWNDDLKKYMFLSKEKRAVTHLMEVICGFHSRILGEDQILGQIKDAYKTAISDNSISSELQKMFEIAIACGKKFKTECKMFEVPVSSVSISINSALLKGCRKFMVLGYGEIGKLAIKHLLSHKVECIYLIVRDKSKASDLEGEIVEVLDFNEKNQVINEVDCIVSCTAAPHTVVRNEDIKTEGDIIHIYDLAVPRDVDKELSEKERVILKDIDEISKIDDKNKKIRKERMEEYKHIVEESIEEFLNWLKIREVSSKIRNIKIRENEICSERIKTFSNKGNGENAKLAERMIKSTADAYVNRAIELLKSEALKGSDSSCAEIIEKIFLT GT:EXON 1|1-400:0| SW:ID HEM1_CLOPE SW:DE RecName: Full=Glutamyl-tRNA reductase; Short=GluTR; EC=1.2.1.70; SW:GN Name=hemA; OrderedLocusNames=CPE1437; SW:KW Complete proteome; NADP; Oxidoreductase; Porphyrin biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->400|HEM1_CLOPE|0.0|100.0|400/400| GO:SWS:NREP 3 GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0006779|"GO:porphyrin biosynthetic process"|Porphyrin biosynthesis| PROS 93->116|PS00747|GLUTR|PDOC00608| SEG 157->166|vssvsisins| SEG 280->299|ilkdideiskiddknkkirk| BL:PDB:NREP 2 BL:PDB:REP 22->70|1yb3A|8e-04|30.6|49/163| BL:PDB:REP 41->279|1gpjA|3e-20|32.0|228/399| RP:PDB:NREP 1 RP:PDB:REP 90->218|2eggB|7e-06|10.3|126/166| RP:PFM:NREP 2 RP:PFM:REP 5->149|PF05201|1e-20|36.6|145/152|GlutR_N| RP:PFM:REP 308->398|PF00745|2e-04|30.8|91/101|GlutR_dimer| HM:PFM:NREP 3 HM:PFM:REP 8->150|PF05201|2.8e-41|34.8|141/152|GlutR_N| HM:PFM:REP 172->289|PF01488|7.3e-26|33.9|118/135|Shikimate_DH| HM:PFM:REP 306->398|PF00745|1.1e-08|25.8|93/101|GlutR_dimer| GO:PFM:NREP 8 GO:PFM GO:0008883|"GO:glutamyl-tRNA reductase activity"|PF05201|IPR015895| GO:PFM GO:0033014|"GO:tetrapyrrole biosynthetic process"|PF05201|IPR015895| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF05201|IPR015895| GO:PFM GO:0055114|"GO:oxidation reduction"|PF05201|IPR015895| GO:PFM GO:0008883|"GO:glutamyl-tRNA reductase activity"|PF00745|IPR015896| GO:PFM GO:0033014|"GO:tetrapyrrole biosynthetic process"|PF00745|IPR015896| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF00745|IPR015896| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00745|IPR015896| RP:SCP:NREP 2 RP:SCP:REP 2->152|1gpjA3|7e-34|25.9|139/143|d.58.39.1| RP:SCP:REP 173->279|1omoA|1e-07|16.8|107/320|c.2.1.13| HM:SCP:REP 1->152|1gpjA3|9.4e-35|34.3|140/0|d.58.39.1|1/1|Glutamyl tRNA-reductase catalytic, N-terminal domain| HM:SCP:REP 173->300|1gpjA2|6.6e-18|23.4|128/0|c.2.1.7|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 662 OP:NHOMOORG 633 OP:PATTERN ---1--11---------1-1---111111-111111111111111-1-111111-------11----1 121-1111111-1111111-11111111111111111-1111111-1-------------111-11-1-11--------1-1111111-----------11211111111-111111-------11111111111111111---11111111111111111111111111111111111111111111---11111111111111111111111111111111111111111111111111111111111111-------------11---------------------------------------------1---------11111-------1-11-111111211---1-2111111--1111--1-11-11----------------------------------------------------------------------------------------------------------------------------11111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111-111111111111111111111111111---111111111111111111111-----11111111111111111111111111111111111111111111111111111111111111111111111111----------------------------------------------11-----111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111I111113114-31-1----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 254 STR:RPRED 63.5 SQ:SECSTR #####################EEGGGHHHHHHHHHHccEEEEEEETTEEEEEEEccTTcHHHHHHHTTHT####cTTHHHHHHHHTTccEEEEEEEccTTHHHHHHHHTccEEEEcTTcTTTTGGGGGccEEcHHHHHHTcccEEEEETTEEEEEccHHHHHHHHHHHHTTTTccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHTcTTccEEEEcccGGGHHHHHHHHHTTTcEEEEcccccccHHHHHHHHHHHHT######################################################################################################################### DISOP:02AL 351-355, 379-388| PSIPRED cEEEEEEcccccHHHHHHHcccHHHHHHHHHHHHHHHccEEEEEccccEEEEEEEcccccHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHccEEcHHHHHHHHccccEEEEccccccccccHHHHccccccEEEEEccccccccHHHcccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccc //