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Clostridium perfringens str. 13 (cper0)
Gene : lexA
DDBJ      :lexA         LexA repressor
Swiss-Prot:LEXA_CLOPE   RecName: Full=LexA repressor;         EC=3.4.21.88;

Homologs  Archaea  0/68 : Bacteria  667/915 : Eukaryota  3/199 : Viruses  5/175   --->[See Alignment]
a.4.5b.87.1
:203 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->201 1jhhA PDBj 3e-30 36.4 %
:RPS:PDB   11->79 2dk8A PDBj 6e-10 11.9 %
:RPS:PDB   99->203 1ay9A PDBj 2e-26 30.8 %
:RPS:SCOP  17->82 2pg4A1  a.4.5.48 * 3e-17 31.2 %
:RPS:SCOP  99->203 1ay9A  b.87.1.1 * 9e-27 30.8 %
:HMM:SCOP  4->74 1jhfA1 a.4.5.2 * 1.5e-20 52.1 %
:HMM:SCOP  80->202 1jhfA2 b.87.1.1 * 5.2e-36 44.3 %
:RPS:PFM   9->67 PF01726 * LexA_DNA_bind 6e-17 59.3 %
:HMM:PFM   7->67 PF01726 * LexA_DNA_bind 1.3e-24 49.2 61/65  
:HMM:PFM   122->189 PF00717 * Peptidase_S24 3.1e-18 37.3 67/70  
:BLT:SWISS 1->203 LEXA_CLOPE e-114 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80867.1 GT:GENE lexA GT:PRODUCT LexA repressor GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1359730..1360341) GB:FROM 1359730 GB:TO 1360341 GB:DIRECTION - GB:GENE lexA GB:PRODUCT LexA repressor GB:NOTE 203 aa, similar to gpu:AP001515_90 transcriptional repressor of the SOS regulon from Bacillus halodurans (207 aa); 57.4% identity in 195 aa overlap CPE1161 GB:PROTEIN_ID BAB80867.1 LENGTH 203 SQ:AASEQ MIIKENSDKQTQIYNFLIEFTKSKGYPPSVREICQAVSLKSTSTVHGHLKRLEKKGLIYRDPTKPRALEIVELSNEEKELIDIPIVGKVTAGMPILATENIEDMFQMPINYVKHNNDLFILKVTGDSMIEAGILDGDLAIIEQKNVATNGDIVVALIENEATIKRFFKENGFIRLQPENKNYEPIIVEDCSILGKLVGIYRAY GT:EXON 1|1-203:0| SW:ID LEXA_CLOPE SW:DE RecName: Full=LexA repressor; EC=3.4.21.88; SW:GN Name=lexA; OrderedLocusNames=CPE1161; SW:KW Autocatalytic cleavage; Complete proteome; DNA damage; DNA repair;DNA replication; DNA-binding; Hydrolase; Repressor; SOS response;Transcription; Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->203|LEXA_CLOPE|e-114|100.0|203/203| GO:SWS:NREP 8 GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0009432|"GO:SOS response"|SOS response| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| BL:PDB:NREP 1 BL:PDB:REP 9->201|1jhhA|3e-30|36.4|187/197| RP:PDB:NREP 2 RP:PDB:REP 11->79|2dk8A|6e-10|11.9|67/81| RP:PDB:REP 99->203|1ay9A|2e-26|30.8|104/108| RP:PFM:NREP 1 RP:PFM:REP 9->67|PF01726|6e-17|59.3|59/64|LexA_DNA_bind| HM:PFM:NREP 2 HM:PFM:REP 7->67|PF01726|1.3e-24|49.2|61/65|LexA_DNA_bind| HM:PFM:REP 122->189|PF00717|3.1e-18|37.3|67/70|Peptidase_S24| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF01726|IPR006199| GO:PFM GO:0006508|"GO:proteolysis"|PF01726|IPR006199| RP:SCP:NREP 2 RP:SCP:REP 17->82|2pg4A1|3e-17|31.2|64/92|a.4.5.48| RP:SCP:REP 99->203|1ay9A|9e-27|30.8|104/108|b.87.1.1| HM:SCP:REP 4->74|1jhfA1|1.5e-20|52.1|71/0|a.4.5.2|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 80->202|1jhfA2|5.2e-36|44.3|122/126|b.87.1.1|1/1|LexA/Signal peptidase| OP:NHOMO 860 OP:NHOMOORG 675 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111112222111111111111232111--111-2121111111112211111--1-1---1---------1----2-2---------------2---1112212111111114114111111----22222212-1111-2222222222221----11122111111211112212121221111111111111111111321111112111111-1111111-111111111111111111111----------------------------------------------31123222222212121221212112-1112221122211221---11--1-11111-1111211111111111111111111111-23121121111-1111111111111111111111111111111111111111111--------------11-------------2111111111111111111111111111111111111111222112111111211111111311---------12111121-113-1-111-2-211211311111112-------------------------21111121111111222211111121111111----112------22111321111111111-1111111111111111112342111122212121221222222211111111-111111111211---1-----32211212211111111111111121131-1---1111212322122331225---------21112111211111111222222221111--31111112------------------------------------111111111112- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---------1------------------------- ------------------------------------------------------------------------------------1---1---------------------------1---1--------------1--------------------------------------- STR:NPRED 203 STR:RPRED 100.0 SQ:SECSTR HHHHHHcHHHHHHHHHHHHHHHHccccEEHHHHHHHcTTccHHHHHHHHHHHHHHTcEEEEEccccEcEEEEEccccccHccccccTTTTccccccccccccccccHHHHHcccGGGEEEEEccccTTGGGTccTTcEEEEEccccccTTcEEEEEETTEEEEEEEEccccccEEEcccTTcccEEcccEEEEEEEEEEEccc DISOP:02AL 1-5, 69-73| PSIPRED cccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHcccEEEcccccEEEEEEccccccccccccccccccccccccccccccccEEEccHHHccccccEEEEEEEcccccccccccccEEEEcccccccccEEEEEEEcccEEEEEEEEEccEEEEEEccccccccccccEEEEEEEEEEEEcc //