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Clostridium perfringens str. 13 (cper0)
Gene : map.1
DDBJ      :map          probable methionine aminopeptidase
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  907/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
d.127.1g.74.1
:289 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->21 1tm6A PDBj 4e-04 76.5 %
:BLT:PDB   44->287 1xnzA PDBj 2e-63 47.7 %
:RPS:PDB   44->287 2bb7A PDBj 6e-63 46.9 %
:RPS:SCOP  44->289 1b59A2  d.127.1.1 * 2e-63 26.1 %
:HMM:SCOP  3->26 1ozbI_ g.74.1.1 * 1.9e-06 58.3 %
:HMM:SCOP  41->290 1o0xA_ d.127.1.1 * 1.6e-83 45.0 %
:RPS:PFM   5->20 PF02810 * SEC-C 5e-04 81.2 %
:RPS:PFM   53->245 PF00557 * Peptidase_M24 9e-33 43.1 %
:HMM:PFM   51->281 PF00557 * Peptidase_M24 1e-52 36.5 200/203  
:HMM:PFM   5->24 PF02810 * SEC-C 6.2e-14 65.0 20/21  
:BLT:SWISS 2->31 SECA_CHLSY 2e-04 46.7 %
:BLT:SWISS 5->21 SECA_PELPB 2e-04 82.4 %
:BLT:SWISS 46->287 AMPM1_SYNY3 8e-76 55.6 %
:PROS 206->224|PS00680|MAP_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81088.1 GT:GENE map.1 GT:PRODUCT probable methionine aminopeptidase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1633244..1634113) GB:FROM 1633244 GB:TO 1634113 GB:DIRECTION - GB:GENE map GB:PRODUCT probable methionine aminopeptidase GB:NOTE 289 aa, similar to pir:D83189 methionine aminopeptidase PA3657 from Pseudomonas aeruginosa (strain PAO1) (261 aa); 55.9% identity in 245 aa overlap CPE1382 GB:PROTEIN_ID BAB81088.1 LENGTH 289 SQ:AASEQ MRINRNDLCWCNSGKKYKKCHMEFDERIENLAREGFEVPTRDIIKNEEQIEGIRKSAEINNAVLDLVAEKIKAGMSTEDINKIVHDYTVSRGAIPAPLNYGGFPKSVCTSINDEVCHGIPDENIILKEGDIINVDVSTIYNGYYSDASRMFIIGEASENAKRLVKVAKECLEKGIEAVKPWGFLGDIGAAIQEHAEKNGYSVVRDFGGHGVGLKFHEDPFVYHYGDAGEGMVLVPGMIFTIEPMINEGKYDVFVDADNDWTALTMDGSLSAQWEHTILVTEDGIEIIAK GT:EXON 1|1-289:0| BL:SWS:NREP 3 BL:SWS:REP 2->31|SECA_CHLSY|2e-04|46.7|30/995| BL:SWS:REP 5->21|SECA_PELPB|2e-04|82.4|17/1024| BL:SWS:REP 46->287|AMPM1_SYNY3|8e-76|55.6|241/253| PROS 206->224|PS00680|MAP_1|PDOC00575| BL:PDB:NREP 2 BL:PDB:REP 5->21|1tm6A|4e-04|76.5|17/22| BL:PDB:REP 44->287|1xnzA|2e-63|47.7|243/262| RP:PDB:NREP 1 RP:PDB:REP 44->287|2bb7A|6e-63|46.9|243/258| RP:PFM:NREP 2 RP:PFM:REP 5->20|PF02810|5e-04|81.2|16/21|SEC-C| RP:PFM:REP 53->245|PF00557|9e-33|43.1|181/203|Peptidase_M24| HM:PFM:NREP 2 HM:PFM:REP 51->281|PF00557|1e-52|36.5|200/203|Peptidase_M24| HM:PFM:REP 5->24|PF02810|6.2e-14|65.0|20/21|SEC-C| GO:PFM:NREP 1 GO:PFM GO:0009987|"GO:cellular process"|PF00557|IPR000994| RP:SCP:NREP 1 RP:SCP:REP 44->289|1b59A2|2e-63|26.1|230/281|d.127.1.1| HM:SCP:REP 3->26|1ozbI_|1.9e-06|58.3|24/24|g.74.1.1|1/1|Sec-C motif| HM:SCP:REP 41->290|1o0xA_|1.6e-83|45.0|249/249|d.127.1.1|1/1|Creatinase/aminopeptidase| OP:NHOMO 2328 OP:NHOMOORG 1154 OP:PATTERN 112-2223333333211221111-1--1------1121211111111--2111-43333442222-11 2221534244435242233-34333533333355453444121332323223544324113342524655211111112142322122222213221--1121113221222222221211111311221222122322232214312312222211111111231222221111111111112312222323466666666466666642444466744454443333337533333333333333332232323233223332233332322332222232122222222222222222222222221222233222333323225444545534326333333321113221233232322232222212321111211111112221111112111111111115-222221221221233222222242312221232222221111111111112112111111122111111111111111111111111311111112223222222222222222222231111111111111122123112112112111111111111122122423221322221221112114323222111-2111111121222222211121111113124122311111113222121311131-1111111111121111212222222222-22222222222222222223331121212111111111111113221111111333333322333111111111222211312111111111111111222222211111333322222122212221111111111111111111212112221211111111111142211111111111111111112-22222122222212221111222221222111 3311243-721-2221111322122222211111111111111111111111121111111122111111122121111111112211-14212322222221444-241423223222232224422239212242222322422221121231223211-2222-223211232224X3232275751542463344 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 289 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHccEEEEcTTTccHHHHHHHHHHcTTcEEEEcHHccccHHHHHHHHHHHHHHHHHHHHHGGGccTTccHHHHHHHHHHHHHHTccEEccTTGGGcccccEEEETTEEEcccccTTccccTTcEEEEEEEEEETTEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHTTcEEcccccEEEccccccEEEEEcccccTTccccccTTcEEEEccEEEcccccEEEEcTTcccEEETTcccEEEccEEEEEcccEEEETTc DISOP:02AL 1-3| PSIPRED ccccccccEEEcccHHHccccccccccHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccEEEcccccccccccccccEEEccccEEEEEEEEEEccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccEEccccccccccccccccccccEEEEccEEEEEccccccccccEEEccccccccEEEccccEEEEEEEEEEcccccEEccc //