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Clostridium perfringens str. 13 (cper0)
Gene : mdh
DDBJ      :mdh          probable alcohol dehydrogenase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  624/915 : Eukaryota  154/199 : Viruses  0/175   --->[See Alignment]
e.22.1
:384 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->368 3bfjA PDBj 7e-61 38.1 %
:RPS:PDB   1->383 2bi4A PDBj 3e-73 32.4 %
:RPS:SCOP  2->383 1rrmA  e.22.1.2 * 6e-97 31.9 %
:HMM:SCOP  5->383 1vljA_ e.22.1.2 * 1.5e-115 41.8 %
:RPS:PFM   10->365 PF00465 * Fe-ADH 5e-78 44.3 %
:HMM:PFM   8->367 PF00465 * Fe-ADH 2e-118 40.7 354/365  
:BLT:SWISS 5->384 GBSB_BACSU 8e-65 37.5 %
:PROS 170->198|PS00913|ADH_IRON_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB79791.1 GT:GENE mdh GT:PRODUCT probable alcohol dehydrogenase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 119183..120337 GB:FROM 119183 GB:TO 120337 GB:DIRECTION + GB:GENE mdh GB:PRODUCT probable alcohol dehydrogenase GB:NOTE 384 aa, similar to pir:A42952 methanol dehydrogenase (EC 1.1.1.244) from Bacillus sp. (381 aa); 35.4% identity in 381 aa overlap CPE0085 GB:PROTEIN_ID BAB79791.1 LENGTH 384 SQ:AASEQ MANQFIMPKRIISGENALNESKAYLKSFGKRVLIVTDKVMTDLGNVKVLTEVLDSENIEHVLYNEINSEPTDTMIEKGIKLYKENQCDFLIGLGGGSPIDSTKAIGAMITNEGKISDYMGREIEKELPPFAVIPTTAGTGSEATQFTIITDTKNDVKMLLKGANLLPNLAIVDPRFTMTAPAKITAATGLDALTHAIEAYTSRKAQPLSDSFAVSAVKRIFKYLPIAFDTPKDLKAREEMSIAALEAGIAFNNSSVTIVHGMSRPIGALFHVPHGLSNAMLLEACFTYVVDGAYDRFAQLAKEINIANDNMSNEEAAKAFIDEVVKLMVKLEIPTLEEFGVDKTKFFDNIEKMAADAMESGSPSNTRKIIEVDDVIKIYNNLWR GT:EXON 1|1-384:0| BL:SWS:NREP 1 BL:SWS:REP 5->384|GBSB_BACSU|8e-65|37.5|371/402| PROS 170->198|PS00913|ADH_IRON_1|PDOC00059| BL:PDB:NREP 1 BL:PDB:REP 29->368|3bfjA|7e-61|38.1|336/382| RP:PDB:NREP 1 RP:PDB:REP 1->383|2bi4A|3e-73|32.4|377/382| RP:PFM:NREP 1 RP:PFM:REP 10->365|PF00465|5e-78|44.3|350/364|Fe-ADH| HM:PFM:NREP 1 HM:PFM:REP 8->367|PF00465|2e-118|40.7|354/365|Fe-ADH| GO:PFM:NREP 3 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00465|IPR001670| GO:PFM GO:0046872|"GO:metal ion binding"|PF00465|IPR001670| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00465|IPR001670| RP:SCP:NREP 1 RP:SCP:REP 2->383|1rrmA|6e-97|31.9|376/385|e.22.1.2| HM:SCP:REP 5->383|1vljA_|1.5e-115|41.8|373/0|e.22.1.2|1/1|Dehydroquinate synthase-like| OP:NHOMO 2303 OP:NHOMOORG 816 OP:PATTERN 11111---112112111----1-31-----2---1---1---111-11--111-1211221-12---2 -11-----222----------1--15-----141112486-1------1---131-------1--12---121112323122211-1132241222-----11-121--1---------------2233212221222222111112-11--111-----11---1111---------------1---443433224243332333333625453333263522344444531111111111111111-22--314-22-31-1224422311112111222222222233333333333122222222222232211-22212447B666656686947GG4897574124552244569122326424223-111--------1-311---2522311111111112--16--4-2421-4553323844334-112-143233211212222223--1--12-----------------------------1-2212-54143234433222222222333325124862-1232121112244341111--122-------1--111-754C457479666-43442-6B3----221-1112----1------------1-----65A32-224142333335843344444464-----1-------74663516668688876-66666876666876666678A9563368867787777777777445444461-433334333333---------1111-2326333415--------233334333332133341522654313222---111-1-233354444456545-----------------4112222--------2-1------------------2------3323442434-12 --2232--21-4--1324222222322111222333222222211112232163221111111---1-1------11111------21-34222321111212111-15121221231-111111111-491-33111111-111111111-1111111111-31-1112A112--32281112-----4--1-1---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 100.0 SQ:SECSTR ccccccccccEEEcTTGGGGHHHHHHHTTcEEEEEccHHHHHTTTTHHHHHHHHHTTcEEEEEccccccccHHHHHHHHHHHHTTTccEEEEEccHHHHHHHHHHHHHTTcGGGccccTTcccccccccEEEEcccccccTTTccEEEEEccTTccEEEEEcTTccccEEEEcHHHHTTccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHTTHHHHHHHTTcHHHHHHHHHHHHHHHHHHTTTcccHHHHTTHHHHHHHcccHHHHHHHHHHHHHHHHGGGcTTHHHHHHHTTTcccTTccHHHHHHHHHHHHHHHHHHHTcccTTTTTccGTccEGGHHHHHHHHHHcGGGGGccccccHHHHHHHHHHHcE DISOP:02AL 384-385| PSIPRED cccEEEcccEEEEcccHHHHHHHHHHHHccEEEEEccHHHHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccHHHHHccccccccccEEEEEccccccccccccEEEEEccccEEEEEEcHHHccEEEEEcHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcc //