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Clostridium perfringens str. 13 (cper0)
Gene : mutS
DDBJ      :mutS         DNA mismatch repair protein
Swiss-Prot:MUTS_CLOPE   RecName: Full=DNA mismatch repair protein mutS;

Homologs  Archaea  19/68 : Bacteria  781/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
a.113.1c.37.1c.55.6d.203.1d.75.2
:909 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->800 1ng9A PDBj e-144 38.4 %
:RPS:PDB   2->803 1e3mA PDBj e-142 33.5 %
:RPS:SCOP  2->109 1e3mA4  d.75.2.1 * 6e-46 42.6 %
:RPS:SCOP  114->277 1ewqA3  c.55.6.1 * 7e-25 23.1 %
:RPS:SCOP  264->565 1e3mA1  a.113.1.1 * 2e-86 35.7 %
:RPS:SCOP  608->629 1e6cA  c.37.1.2 * 8e-04 22.7 %
:RPS:SCOP  683->788 2v4jC1  d.203.1.1 * 1e-26 14.4 %
:HMM:SCOP  1->109 1e3mA4 d.75.2.1 * 1.2e-44 56.0 %
:HMM:SCOP  113->277 1ewqA3 c.55.6.1 * 6e-29 38.0 %
:HMM:SCOP  264->565 1e3mA1 a.113.1.1 * 1.4e-90 44.8 %
:HMM:SCOP  566->803 1e3mA2 c.37.1.12 * 2.3e-67 38.9 %
:RPS:PFM   4->115 PF01624 * MutS_I 1e-37 58.9 %
:RPS:PFM   137->250 PF05188 * MutS_II 4e-08 35.4 %
:RPS:PFM   259->561 PF05192 * MutS_III 5e-65 49.5 %
:RPS:PFM   567->796 PF00488 * MutS_V 5e-77 60.2 %
:HMM:PFM   566->801 PF00488 * MutS_V 4.6e-106 61.8 233/234  
:HMM:PFM   259->561 PF05192 * MutS_III 4e-67 43.8 210/219  
:HMM:PFM   4->115 PF01624 * MutS_I 9.4e-49 60.7 112/113  
:HMM:PFM   124->249 PF05188 * MutS_II 6.1e-13 27.4 124/137  
:BLT:SWISS 1->909 MUTS_CLOPE 0.0 100.0 %
:PROS 689->705|PS00486|DNA_MISMATCH_REPAIR_2
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80861.1 GT:GENE mutS GT:PRODUCT DNA mismatch repair protein GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1351007..1353736 GB:FROM 1351007 GB:TO 1353736 GB:DIRECTION + GB:GENE mutS GB:PRODUCT DNA mismatch repair protein GB:NOTE 909 aa, similar to sp:MUTS_BACSU DNA MISMATCH REPAIR PROTEIN MUTS from Bacillus subtilis (858 aa); 45.2% identity in 901 aa overlap. 1 putative transmembrane region was found by PSORT CPE1155 GB:PROTEIN_ID BAB80861.1 LENGTH 909 SQ:AASEQ MKLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPMCGIPFHASNSYIGRLVAKGYKVAICEQVEDPKVAKGIVKRDVIKVITPGTYTDSSFVEETKNNYIMTIYSDLERNRCSLAITDISTGDFLATEGELEKGVILDEISKFNPKEIILLDSLDQELIKDITLTTPALISRKPIEYFEEKFEEVLNAQFGEKSNSLSLMVKKSSNALVKYILDTQKISLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETSMGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSIGKIPNVKGIIENCTSSLLRNYHHNLDDLRDIYELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALENDFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEIHGVRNYSVAVKEVDNNIIFLRKIIEGGADQSYGIEVAKLAGIPDDVINRAKEILEKLEMESSKDNLDLALKEVNASKEEMKEASITSSYEVKETLVEEDKIEIKEEVISKASEAKTHKEDDQIQLDFSAIGKDNLIKELSEVDILSLNPMEAMNRLYALVKEAKNLI GT:EXON 1|1-909:0| SW:ID MUTS_CLOPE SW:DE RecName: Full=DNA mismatch repair protein mutS; SW:GN Name=mutS; OrderedLocusNames=CPE1155; SW:KW ATP-binding; Complete proteome; DNA damage; DNA repair; DNA-binding;Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->909|MUTS_CLOPE|0.0|100.0|909/909| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| PROS 689->705|PS00486|DNA_MISMATCH_REPAIR_2|PDOC00388| COIL:NAA 29 COIL:NSEG 1 COIL:REGION 797->825| SEG 838->855|veedkieikeeviskase| BL:PDB:NREP 1 BL:PDB:REP 4->800|1ng9A|e-144|38.4|773/794| RP:PDB:NREP 1 RP:PDB:REP 2->803|1e3mA|e-142|33.5|755/765| RP:PFM:NREP 4 RP:PFM:REP 4->115|PF01624|1e-37|58.9|112/113|MutS_I| RP:PFM:REP 137->250|PF05188|4e-08|35.4|113/135|MutS_II| RP:PFM:REP 259->561|PF05192|5e-65|49.5|301/309|MutS_III| RP:PFM:REP 567->796|PF00488|5e-77|60.2|226/229|MutS_V| HM:PFM:NREP 4 HM:PFM:REP 566->801|PF00488|4.6e-106|61.8|233/234|MutS_V| HM:PFM:REP 259->561|PF05192|4e-67|43.8|210/219|MutS_III| HM:PFM:REP 4->115|PF01624|9.4e-49|60.7|112/113|MutS_I| HM:PFM:REP 124->249|PF05188|6.1e-13|27.4|124/137|MutS_II| GO:PFM:NREP 12 GO:PFM GO:0005524|"GO:ATP binding"|PF01624|IPR007695| GO:PFM GO:0006298|"GO:mismatch repair"|PF01624|IPR007695| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF01624|IPR007695| GO:PFM GO:0005524|"GO:ATP binding"|PF05188|IPR007860| GO:PFM GO:0006298|"GO:mismatch repair"|PF05188|IPR007860| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF05188|IPR007860| GO:PFM GO:0005524|"GO:ATP binding"|PF05192|IPR007696| GO:PFM GO:0006298|"GO:mismatch repair"|PF05192|IPR007696| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF05192|IPR007696| GO:PFM GO:0005524|"GO:ATP binding"|PF00488|IPR000432| GO:PFM GO:0006298|"GO:mismatch repair"|PF00488|IPR000432| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF00488|IPR000432| RP:SCP:NREP 5 RP:SCP:REP 2->109|1e3mA4|6e-46|42.6|108/115|d.75.2.1| RP:SCP:REP 114->277|1ewqA3|7e-25|23.1|143/146|c.55.6.1| RP:SCP:REP 264->565|1e3mA1|2e-86|35.7|297/297|a.113.1.1| RP:SCP:REP 608->629|1e6cA|8e-04|22.7|22/170|c.37.1.2| RP:SCP:REP 683->788|2v4jC1|1e-26|14.4|97/103|d.203.1.1| HM:SCP:REP 1->109|1e3mA4|1.2e-44|56.0|109/115|d.75.2.1|1/1|DNA repair protein MutS, domain I| HM:SCP:REP 113->277|1ewqA3|6e-29|38.0|142/0|c.55.6.1|1/1|DNA repair protein MutS, domain II| HM:SCP:REP 264->565|1e3mA1|1.4e-90|44.8|297/297|a.113.1.1|1/1|DNA repair protein MutS, domain III| HM:SCP:REP 566->803|1e3mA2|2.3e-67|38.9|234/234|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2637 OP:NHOMOORG 997 OP:PATTERN ------------------------22222222-----------1111111111----------2---- 322-------------------------------------2-----------------------------------------121221443413333112332328352311111111111111122222221222233221113321211122222211212222122212122222122122212222122233333233333333333222233322233232222223333333333333333323333322233223332222332222212222222222322122222222222222222222222332222222224454554555535454443445643222332233332323222342232221111111111111111111111111111111111-131111111111111111111111111111111111111111111111121111111211111111111111111111111111-11111111111111111111111111111111111111--111111-11121111111211111111111222111311112222222211222222222212224112----------1--1-1--11-221331111111111111111111111111111111-1211211-11121111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111211111111111111-111111121111111111111111-1111111111111111111111111111111111111111111111--1122222222222212212-------------------------3333333223111 3322666-C4525556667466655466666675666676666765656655665666666645346426664446637866666644-6C6666666667567652795A5979595545555793B3zz8-76A4454655634554564475A74538F47573343745967469*88977A56F69H7775564 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 799 STR:RPRED 87.9 SQ:SECSTR #GGGccHHHHHHHHHTcTTcEEEEEcTTEEEEEHHHHHHHHHHHTcccEEEccTcTcccEEEEEEGGGHHHHHHHHHHTTccEEEEEEcccGGGccccccEEEEEEEcTTTcccTTTccTTccccEEEEEEcTccccEEEEEEcTTTccEEEEccccHHHHHHHHHHHHcccEEEEETTcccGGTTTcTTEEEcEEEEcGGGGcHHHHHHHHHHHHTccccGGGTcTTcHHHHHHHHHHHHHccccTTccccEccGGGGGccEcHHHHHHHTccccTTccccTTcHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHTTTHGGHHHHHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHTTHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHcccccccccTTcccccTTccHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcTTcEEEEETTTEEEEEEEHHHHTTccTcETcEEEEcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccEEcccccEEEEEEccTTTTTccccccccEEEEEcEEcccccEEEEccTccHHHHHHHHHHEEEHHHTTTccccccEEEEccccEEEEEEccHHHHHHHHHHHccTTcHHHHHHHHHccTTcEEEEcccccccTTHHHHHHHHHHHHHHHTTccEEEEEEcccGGGGGHHHHTTEEEEEEEEcEEEEccccEEEEEEEEcccccccHHHHHHHTTccHHHHHHHHHHHHHHH############################################################################################################# DISOP:02AL 52-58, 93-96, 798-824, 844-869| PSIPRED ccccHHHHHHHHHHHccccEEEEEEEccEEEEEHHHHHHHHHHHHHHHccccccccccccEEcccHHHHHHHHHHHHHcccEEEEEEEEccHHHccccEEEEEEEEEccEEEEEccccccccccEEEEEEEcccccEEEEEEEEccccEEEEEEccccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccEEEEcHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHcccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccEEEEEEEcHHHcccccccEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccEEEEEEccHHHHHHHccccccccccEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccEEccEEEEEEEEcccccHHHccHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEccHHHHHHHHccccEEEEEEEEEEcccEEEEEEEEEEccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcc //