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Clostridium perfringens str. 13 (cper0)
Gene : nagA
DDBJ      :nagA         N-acetylglucosamine-6-phosphate deacetylase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  561/915 : Eukaryota  133/199 : Viruses  0/175   --->[See Alignment]
b.92.1c.1.9
:378 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->373 3iv8A PDBj 2e-63 39.3 %
:RPS:PDB   2->374 3egjA PDBj 1e-45 34.7 %
:RPS:SCOP  2->74 1ymyA1  b.92.1.5 * 7e-13 17.8 %
:RPS:SCOP  50->344 1o12A2  c.1.9.10 * 8e-98 35.3 %
:RPS:SCOP  348->377 1m7jA2  b.92.1.6 * 1e-04 43.3 %
:HMM:SCOP  1->57 1kcxA1 b.92.1.3 * 1.5e-06 36.8 %
:HMM:SCOP  50->346 1yrrA2 c.1.9.10 * 3.4e-96 45.9 %
:RPS:PFM   293->360 PF01979 * Amidohydro_1 2e-05 36.8 %
:HMM:PFM   46->360 PF01979 * Amidohydro_1 3.6e-28 20.1 288/328  
:BLT:SWISS 1->374 NAGA_BACSH 5e-73 39.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81882.1 GT:GENE nagA GT:PRODUCT N-acetylglucosamine-6-phosphate deacetylase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 2497278..2498414 GB:FROM 2497278 GB:TO 2498414 GB:DIRECTION + GB:GENE nagA GB:PRODUCT N-acetylglucosamine-6-phosphate deacetylase GB:NOTE 378 aa, similar to gpu:AP001508_144 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Bacillus halodurans (397 aa); 40.7% identity in 376 aa overlap. 1 putative transmembrane region was found by PSORT CPE2176 GB:PROTEIN_ID BAB81882.1 LENGTH 378 SQ:AASEQ MLIKNCNIVYLDKIEKGNILIENGKIKAINPKEECDCEVIDGEGLFLSPGFIDVHIHGAGGHDTMDGTYEAINEISKVIVKHGTTSFLPTTMTVAAEDVCKSMEAIHKAKTEGTDGANVLGAHLEGPFISTSAIGAQNPDFLIPPTKENFYKLVGEHEDDVVSITLAPEVEGAKELTKFLSEKGIVVSMGHTKATYEEAMEGIKCGCSHATHLFNAMTPFTHREPGVVGAVFDSEITTETISDGIHIAYPSLRVAYKQKGTDKVLLITDAMMACCMPDGMYSLGGQDVEVKNGAARLLSGSLAGSILTLDVAVKNIFKNTNYPLNEVIKMATYNGAKHCKVDDKKGLIKEGYDADLILFDDNIDIKYVIVNGKLVHKA GT:EXON 1|1-378:0| BL:SWS:NREP 1 BL:SWS:REP 1->374|NAGA_BACSH|5e-73|39.9|373/387| BL:PDB:NREP 1 BL:PDB:REP 3->373|3iv8A|2e-63|39.3|366/379| RP:PDB:NREP 1 RP:PDB:REP 2->374|3egjA|1e-45|34.7|369/379| RP:PFM:NREP 1 RP:PFM:REP 293->360|PF01979|2e-05|36.8|68/271|Amidohydro_1| HM:PFM:NREP 1 HM:PFM:REP 46->360|PF01979|3.6e-28|20.1|288/328|Amidohydro_1| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF01979|IPR006680| RP:SCP:NREP 3 RP:SCP:REP 2->74|1ymyA1|7e-13|17.8|73/85|b.92.1.5| RP:SCP:REP 50->344|1o12A2|8e-98|35.3|286/288|c.1.9.10| RP:SCP:REP 348->377|1m7jA2|1e-04|43.3|30/61|b.92.1.6| HM:SCP:REP 1->57|1kcxA1|1.5e-06|36.8|57/143|b.92.1.3|1/2|Composite domain of metallo-dependent hydrolases| HM:SCP:REP 50->346|1yrrA2|3.4e-96|45.9|292/0|c.1.9.10|1/1|Metallo-dependent hydrolases| OP:NHOMO 846 OP:NHOMOORG 707 OP:PATTERN ----1---1111111111---------------------------------------1---1------ 111-211-111-1-11111-1---11111111-----2111--123111--1123-11--111111111111---111111-1-----2232-3-------1---1-2-4----------------------------------111111111--111111111-111111-111---1-11-1111-1111-1111111221121112111111111111211122222111-11111111111111111112111121-11111--221121111111111111111111111111111111111111111111111111111-111111111212-2--11111-11-311-----1--11--1111211-12122-------------------11111111111-1111111-11--111111111111------111111111111111111111--1--------------------------------1--1-----111111111111111111111111--1------1---------1-------1----------------------------------------------------------------------1--2111-11-111211111-122211121111--1----------21112111222222222-2222222222222221222111111121211111111111111111122111-12222222222211-------------1-1111111111111111-----------111111111---------111111111-1334222221113322111111111111---1------11111111-----------1-1--111-11-11---11111111111-1 ------1-21-----2-2212111111111111111111111111112111121111-1111111----1--1-1------11111---131-11-2111--1211-1--2111111111-1111113-4A1-21111-111111-11--11-11111111-1-11111111111----------1---2---11---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 378 STR:RPRED 100.0 SQ:SECSTR EEEEccEEEccccEccEEEEEETTEEEEEEEGGGcTccEEEcTTcEEEEcEEEEEEcccTTccTTTcccHHHHHHHHHHHTTTEEEEEEEEEcccHHHHHHHHHHHHHHHHHcHHccccccEEEEcccccGGGcTTccTTTcccccHHcHHHHHHHTGGGEEEEEEcGGGccHcHHHHHHHHTTcEEEEccccccHHHHHHHHHHTccEEccTTcccccccTTccHHHHHHHTcTTcEEEEccccccccHHHHHHHHHHHGGGEEEcccccTTTTccccEEEETTEEEEEETTEEEETTTEEccccccHHHHHHHHHHTTcccHHHHHHTTTHHHHHHHTcTTTcccccTTccccEEEEcTTccEEEEEETTEEEEcG PSIPRED cEEEEEEEEccccEEEEEEEEEccEEEEEEcccccccEEEEccccEEEEcccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHccccHHHHccccHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEccccccccccccccHHHHHHcccccEEEEEcEEEccHHHHHHHHHHcccccEEEEEcccccccccccccccccEEEEEEccEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEccEEEEEc //