[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Clostridium perfringens str. 13 (cper0)
Gene : ntpA
DDBJ      :ntpA         V-type sodium ATP synthase subunit A
Swiss-Prot:VATA_CLOPE   RecName: Full=V-type ATP synthase alpha chain;         EC=3.6.3.14;AltName: Full=V-ATPase subunit A;

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
a.24.11a.69.1b.49.1b.84.1c.37.1
:591 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->564 3a5cA PDBj e-180 58.8 %
:RPS:PDB   1->582 3a5cA PDBj 3e-92 55.8 %
:RPS:SCOP  3->70 1bmfD2  b.49.1.1 * 2e-13 25.0 %
:RPS:SCOP  122->180 1y8nB1  b.84.1.1 * 2e-04 21.4 %
:RPS:SCOP  161->435 1bmfD3  c.37.1.11 * 5e-63 23.2 %
:RPS:SCOP  415->550 1g4uS1  a.24.11.1 * 2e-16 10.6 %
:HMM:SCOP  2->71 1skyB2 b.49.1.1 * 9.7e-13 30.4 %
:HMM:SCOP  160->442 1e79A3 c.37.1.11 * 5.7e-87 41.1 %
:HMM:SCOP  447->562 1skyE1 a.69.1.1 * 7.4e-23 31.6 %
:RPS:PFM   211->435 PF00006 * ATP-synt_ab 4e-63 57.5 %
:RPS:PFM   464->522 PF00306 * ATP-synt_ab_C 2e-07 47.4 %
:HMM:PFM   211->435 PF00006 * ATP-synt_ab 7e-99 61.4 215/215  
:HMM:PFM   456->574 PF00306 * ATP-synt_ab_C 1.2e-18 31.9 91/113  
:HMM:PFM   6->68 PF02874 * ATP-synt_ab_N 4.9e-16 34.9 63/69  
:HMM:PFM   124->143 PF01551 * Peptidase_M23 0.00092 60.0 20/96  
:BLT:SWISS 1->591 VATA_CLOPE 0.0 100.0 %
:PROS 426->435|PS00152|ATPASE_ALPHA_BETA
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81344.1 GT:GENE ntpA GT:PRODUCT V-type sodium ATP synthase subunit A GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1910442..1912217) GB:FROM 1910442 GB:TO 1912217 GB:DIRECTION - GB:GENE ntpA GB:PRODUCT V-type sodium ATP synthase subunit A GB:NOTE 591 aa, similar to sp:NTPA_ENTHR V-TYPE SODIUM ATP SYNTHASE SUBUNIT A (EC 3.6.1.34) (NA(+)- TRANSLOCATING ATPASE SUBUNIT A) from Enterococcus hirae (593 aa); 66.2% identity in 588 aa overlap CPE1638 GB:PROTEIN_ID BAB81344.1 LENGTH 591 SQ:AASEQ MKTGKIIKVSGPLVVAEGMDEANVYDVVKVGEKGLIGEIIEMRGDKASIQVYEETSGIGPGDPVITTGEPLSVELGPGLIESMFDGIQRPLDAFMKAANSAFLSKGVEVKSLNREKKWPFVPTAKVGDKVSAGDVIGTVQETAVVLHRIMVPFGVEGTIKEIKAGDFNVEEVIAVVETEKGDKNLTLMQKWPVRKGRPYARKLNPVEPMTTGQRVIDTFFPVAKGGAAAVPGPFGAGKTVVQHQVAKWGDTEIVVYVGCGERGNEMTDVLNEFPELKDPKTGESLMKRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVSIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRLADYYERAGKVVALGKDGREGAVTAIGAVSPPGGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLYLEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLDKVLKLPVRDRIARSKYISEEEISKMDDILVELKSEMNKLISEGGVLNA GT:EXON 1|1-591:0| SW:ID VATA_CLOPE SW:DE RecName: Full=V-type ATP synthase alpha chain; EC=3.6.3.14;AltName: Full=V-ATPase subunit A; SW:GN Name=atpA; OrderedLocusNames=CPE1638; SW:KW ATP synthesis; ATP-binding; Complete proteome; Hydrogen ion transport;Hydrolase; Ion transport; Nucleotide-binding; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->591|VATA_CLOPE|0.0|100.0|591/591| GO:SWS:NREP 7 GO:SWS GO:0006754|"GO:ATP biosynthetic process"|ATP synthesis| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0015992|"GO:proton transport"|Hydrogen ion transport| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 426->435|PS00152|ATPASE_ALPHA_BETA|PDOC00137| SEG 219->238|ffpvakggaaavpgpfgagk| BL:PDB:NREP 1 BL:PDB:REP 1->564|3a5cA|e-180|58.8|541/561| RP:PDB:NREP 1 RP:PDB:REP 1->582|3a5cA|3e-92|55.8|559/561| RP:PFM:NREP 2 RP:PFM:REP 211->435|PF00006|4e-63|57.5|212/212|ATP-synt_ab| RP:PFM:REP 464->522|PF00306|2e-07|47.4|57/106|ATP-synt_ab_C| HM:PFM:NREP 4 HM:PFM:REP 211->435|PF00006|7e-99|61.4|215/215|ATP-synt_ab| HM:PFM:REP 456->574|PF00306|1.2e-18|31.9|91/113|ATP-synt_ab_C| HM:PFM:REP 6->68|PF02874|4.9e-16|34.9|63/69|ATP-synt_ab_N| HM:PFM:REP 124->143|PF01551|0.00092|60.0|20/96|Peptidase_M23| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00006|IPR000194| GO:PFM GO:0015986|"GO:ATP synthesis coupled proton transport"|PF00306|IPR000793| GO:PFM GO:0016820|"GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances"|PF00306|IPR000793| GO:PFM GO:0033178|"GO:proton-transporting two-sector ATPase complex, catalytic domain"|PF00306|IPR000793| RP:SCP:NREP 4 RP:SCP:REP 3->70|1bmfD2|2e-13|25.0|68/73|b.49.1.1| RP:SCP:REP 122->180|1y8nB1|2e-04|21.4|56/97|b.84.1.1| RP:SCP:REP 161->435|1bmfD3|5e-63|23.2|267/276|c.37.1.11| RP:SCP:REP 415->550|1g4uS1|2e-16|10.6|123/130|a.24.11.1| HM:SCP:REP 2->71|1skyB2|9.7e-13|30.4|69/75|b.49.1.1|1/1|N-terminal domain of alpha and beta subunits of F1 ATP synthase| HM:SCP:REP 160->442|1e79A3|5.7e-87|41.1|270/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 447->562|1skyE1|7.4e-23|31.6|114/114|a.69.1.1|1/1|C-terminal domain of alpha and beta subunits of F1 ATP synthase|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d6-5755443635785553254364A46753A54445A35C57446444i333239ADD3954443344 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 587 STR:RPRED 99.3 SQ:SECSTR cccEEEEEEEETTEEEEEEcTTccTTcEEEETTccEEEEEEEccccEEEEEcccGGGccTTcEEEEccccccEEEcTTcTTcEEETTcccccHTTcccccEETTcccccccccccccEEEEEcccTTcEEcTTcEEEEEccccccEEEEEccTTccEEEEEEccEEEcTTcccEEETcTccEEcccccEEEcTTccccEEEEcccccccccccHHHHHHccccTTcEEEEEccTTccHHHHHHHHHHHccccEEEEEcccccTTTTHHHHTTGGGcEETTTTEEGGGGEEEEEccTTccHHHHHHHHHHHHHHHHHHHHTTcEEEEEEccHHHHHHHHHHHHHHTTccccGGGccTTHHHHHHHHHHTcEEEEETTGTccEEEEEEEEEEccccccccTTHHHHHHHHccEEccccHHHHHTTccccccTTTcccccHHHHHHHHHHHTcTTHHHHHHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHHHTTcccTTcTTTTcccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHTcHHHHHHTTGGGcccTHHHHHHHHHHHHHHHHHccHHccc#### DISOP:02AL 348-351, 590-591| PSIPRED cccEEEEEEEccEEEEEcccccccccEEEEcccEEEEEEEEEcccEEEEEEEccccccccccEEEEcccEEEEEccHHHHHHHHHHHHHHcccccccccccEEEcEEEEEEcccccEEEEEEEEccccEEEccEEEEEEEccccccccEEcccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccEEEEccccccHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHcccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEEEEEcccccccccHHHHcEEEEEEEEEEHHHHHcccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccc //