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Clostridium perfringens str. 13 (cper0)
Gene : pabB
DDBJ      :pabB         para-aminobenzoate synthase component I
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  761/915 : Eukaryota  123/199 : Viruses  1/175   --->[See Alignment]
d.161.1
:448 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   27->448 1k0eA PDBj 8e-64 33.9 %
:RPS:PDB   42->448 3bznA PDBj e-103 15.5 %
:RPS:SCOP  14->448 1k0eA  d.161.1.1 * e-116 32.4 %
:HMM:SCOP  18->448 1i7qA_ d.161.1.1 * 6.4e-137 43.1 %
:RPS:PFM   14->144 PF04715 * Anth_synt_I_N 9e-16 34.9 %
:RPS:PFM   186->424 PF00425 * Chorismate_bind 6e-54 44.8 %
:HMM:PFM   186->440 PF00425 * Chorismate_bind 1.9e-98 51.4 253/257  
:HMM:PFM   12->144 PF04715 * Anth_synt_I_N 4.6e-33 38.0 129/140  
:BLT:SWISS 4->447 TRPE_LACLA 2e-66 34.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80723.1 GT:GENE pabB GT:PRODUCT para-aminobenzoate synthase component I GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1220406..1221752 GB:FROM 1220406 GB:TO 1221752 GB:DIRECTION + GB:GENE pabB GB:PRODUCT para-aminobenzoate synthase component I GB:NOTE 448 aa, similar to gpu:AP001507_90 para-aminobenzoate synthase component I from Bacillus halodurans (486 aa); 37.3% identity in 405 aa overlap CPE1017 GB:PROTEIN_ID BAB80723.1 LENGTH 448 SQ:AASEQ MNFEIKEIENKLKPHEVYFLFKDEINSIFLDSSKEDSEFSLYSFIGLNPFKKFISKGNEIFIDEKLVLGDPFKKLEELILEYKINYNSEIPFLGGAMGYFSYDIGRVIEDMPKSAKDDVCIPDSYFLFYDNVIIFDLRNQKTYITALGIKEESEKSIANIYERIKDKDINLNISLDKNTEFSSNFSREEYINSVKKVKEYIKEGHTYIANLTQRFSCDFNSDPFDTYISLRSINKAPFSCYLNLDGFQIISSSPERFLKVFNNKVETRPIKGTRPRGKDKLEDEKNKKELLNSEKDKSELLMIVDLERNDLSKVCKPFSVKVTELFKLEEYATVFHLVSTVIGELKEDVSSVKCIRECFPGGSITGAPKIRSMEIIEELEGIRRGIYTGSIGYFDLRGNCDFNIVIRTILAKDNKAYFGVGGGITIESEEEMEYEETLDKAKALMRVL GT:EXON 1|1-448:0| BL:SWS:NREP 1 BL:SWS:REP 4->447|TRPE_LACLA|2e-66|34.9|438/456| SEG 278->301|kdkledeknkkellnsekdksell| SEG 374->386|eiieelegirrgi| SEG 427->436|eseeemeyee| BL:PDB:NREP 1 BL:PDB:REP 27->448|1k0eA|8e-64|33.9|401/437| RP:PDB:NREP 1 RP:PDB:REP 42->448|3bznA|e-103|15.5|401/430| RP:PFM:NREP 2 RP:PFM:REP 14->144|PF04715|9e-16|34.9|129/140|Anth_synt_I_N| RP:PFM:REP 186->424|PF00425|6e-54|44.8|239/258|Chorismate_bind| HM:PFM:NREP 2 HM:PFM:REP 186->440|PF00425|1.9e-98|51.4|253/257|Chorismate_bind| HM:PFM:REP 12->144|PF04715|4.6e-33|38.0|129/140|Anth_synt_I_N| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF04715|IPR006805| GO:PFM GO:0016833|"GO:oxo-acid-lyase activity"|PF04715|IPR006805| RP:SCP:NREP 1 RP:SCP:REP 14->448|1k0eA|e-116|32.4|414/438|d.161.1.1| HM:SCP:REP 18->448|1i7qA_|6.4e-137|43.1|427/517|d.161.1.1|1/1|ADC synthase| OP:NHOMO 1842 OP:NHOMOORG 943 OP:PATTERN 11-1--1111111111-112222132222222111111111111111111111111--1--111--11 1111322222232233322-222222222222222222332323112-222222222211221122434221111211----222222222211-1-112-222222222--------------122222222222111111112132522221122222222222234312222222222222222221-23233333333133333322332233222234222222222213333323333333332133-----------11--------1-22211111112112222222222211111111111112--222----22-12----------111111111-1-111112333111--222112-111222222-----222112221121122222222222-22222222222-2222222222222222211222222222222222212212123-----------------------------22222222222222222322222222222222222222212222222221222332222222222222222111222-2221122122222-122222222222222122122-22222122222222221222222222222222222222322222222222221-12222-1---142222222223233322-2212223233233222222223224422222222222222222222222222-3333332232322212221122222222322221221222221222223223222223433222422222222222222222222223222222222222222222223222222-222222--------------------------------------1--1-111222 11----1-1---2222222211322332222222222222222222222223232222233322222212222222212222222222-23222222222222222-12------------------------------------------------------------------2122E2222243452421232222 --1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 447 STR:RPRED 99.8 SQ:SECSTR #ccccTTGGGGcTHHHHHHccccccTTcccGGGTTccTTccHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHccccccEEEEEcTTccEEEEEEEEEEEEccHHHHHHHHHTcTTcTTccEEEEEcccTTcEEEEEEEEEEEEETTEEEEEEEEEEcccHHHHHHHHHHEEEEEEEccHHHHHHHHHHHHHHHTTTcccEEEEEEEEEEEEccccHHHHHHHHHHcTTcEEEEEEEETEEEEEEEccEEEEEETTEEEEEEEEEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHTTccccEEcccEEEEEEEcccEEEEEEEEEEEccccccHHHHHHHHcccTTTcEEcHHHHHHHHHHHcccccTTTTcEEEEEcTccEEEEEEcccEEEEETTEEEEEEEEEEcTTccHHHHHHHHHHHHHHHHTTT PSIPRED cccEEEEEcccccHHHHHHHHccccccEEEEEcccccccccEEEEEEcccEEEEEEccEEEEEEEEEcccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEEccEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHccccccccccccccccEEcccHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEccccHHHHHHHHHHHccccEEEEEEcccEEEEEEcccEEEEEEccEEEEEEccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEccccEEEEEcccEEEEEEEEEEEEcccccHHHHHHHHccccEEccccHHHHHHHHHHHccccccccEEEEEEEcccccEEEEEEEEEEEEEccEEEEEEccEEEccccHHHHHHHHHHHHHHHHHHc //