[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Clostridium perfringens str. 13 (cper0)
Gene : pfs
DDBJ      :pfs          probable purine nucleoside phosphorylase
Swiss-Prot:DEOD_CLOPS   RecName: Full=Purine nucleoside phosphorylase deoD-type;         Short=PNP;         EC=2.4.2.1;

Homologs  Archaea  37/68 : Bacteria  380/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.56.2
:235 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->233 1xe3E PDBj 5e-95 70.0 %
:RPS:PDB   4->235 3ddoC PDBj 9e-71 28.8 %
:RPS:SCOP  4->233 1a69A  c.56.2.1 * 6e-90 51.7 %
:HMM:SCOP  1->237 1ecpA_ c.56.2.1 * 1.6e-95 54.4 %
:RPS:PFM   17->216 PF01048 * PNP_UDP_1 1e-20 34.7 %
:HMM:PFM   15->218 PF01048 * PNP_UDP_1 6.5e-45 32.4 204/234  
:BLT:SWISS 1->235 DEOD_CLOPS e-133 100.0 %
:PROS 61->76|PS01232|PNP_UDP_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81104.1 GT:GENE pfs GT:PRODUCT probable purine nucleoside phosphorylase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 1649585..1650292 GB:FROM 1649585 GB:TO 1650292 GB:DIRECTION + GB:GENE pfs GB:PRODUCT probable purine nucleoside phosphorylase GB:NOTE 235 aa, similar to pir:D75306 purine nucleoside phosphorylase from Deinococcus radiodurans (strain R1) (305 aa); 69.4% identity in 235 aa overlap CPE1398 GB:PROTEIN_ID BAB81104.1 LENGTH 235 SQ:AASEQ MSIHIGAKEGQIAETILLPGDPLRAKFIAETFLENPVCYNEVRGMLGYTGTYKGKRISVQGTGMGVPSISIYVNELIRDYGVKNLIRVGTAGGMQEDIKVRDLVLAMSSHTDSAINKVRFNGLDFAPTASFKLLKAAYDTAVEKGYSPKVGSVFTADSFYNDNPEAWKQWAKFGTLAVEMETAALYTLAAKYGVNALTILTISDHLITAEETTSEERQTTFTKMMEVALDAAITL GT:EXON 1|1-235:0| SW:ID DEOD_CLOPS SW:DE RecName: Full=Purine nucleoside phosphorylase deoD-type; Short=PNP; EC=2.4.2.1; SW:GN Name=deoD; OrderedLocusNames=CPR_1391; SW:KW Complete proteome; Glycosyltransferase; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->235|DEOD_CLOPS|e-133|100.0|235/235| GO:SWS:NREP 2 GO:SWS GO:0016757|"GO:transferase activity, transferring glycosyl groups"|Glycosyltransferase| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| PROS 61->76|PS01232|PNP_UDP_1|PDOC00946| BL:PDB:NREP 1 BL:PDB:REP 1->233|1xe3E|5e-95|70.0|233/234| RP:PDB:NREP 1 RP:PDB:REP 4->235|3ddoC|9e-71|28.8|226/249| RP:PFM:NREP 1 RP:PFM:REP 17->216|PF01048|1e-20|34.7|199/229|PNP_UDP_1| HM:PFM:NREP 1 HM:PFM:REP 15->218|PF01048|6.5e-45|32.4|204/234|PNP_UDP_1| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF01048|IPR000845| GO:PFM GO:0009116|"GO:nucleoside metabolic process"|PF01048|IPR000845| RP:SCP:NREP 1 RP:SCP:REP 4->233|1a69A|6e-90|51.7|230/237|c.56.2.1| HM:SCP:REP 1->237|1ecpA_|1.6e-95|54.4|237/0|c.56.2.1|1/1|Purine and uridine phosphorylases| OP:NHOMO 727 OP:NHOMOORG 428 OP:PATTERN 22213211111111114222222-22222122-------------------------21111--1--- ------1-----1----------------------------------1-------1----111---------------1---1-----1111-111---111-21----1-----------------------------11-----1-1---1------------------------------12111---11111111111111111111111111121121111111112-122222222222222111111-1-22-------111211----2222221---1111111111111122222222222221221112221-11-3-------3-42---122211112111------------111-111----------------------------------------------1--1----------------11-----111---------11------------------------------------------------------------------------------------------------1--------------------1---------------1-----1--1-----------1-1111211-------551---11-222224222432242554494--1----11-11132223222222222222-2222222222222222222222222222323232223232332222222221-22222222222211--11111------11-222222122222222-----------------------------222222222-25444444445344-----------------3--------------121----1-2111311111111111111-11---3------ ----21------11---------------------------------------------------------------------------------------11------------------------------------------------------------1------------11----------------1-1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 235 STR:RPRED 100.0 SQ:SECSTR HcccccccHHTTccEEEEEccTHHHHHHHTHTcEEEEEEEEETTEEEEEEEETTEEEEEEcccccHHHHHHHHHHHHHHTTccEEEEEEEEccccTTccTTcEEEEEEEEEEccGGGHGTccTTccEEccHHHHHHHHHHHHHTTccEEEEEEEEEccccGGGTTHHHHHHHTTcccEEccHHHHHHHHHTTTcEEEEEEEEEEEcccTTTccHHHHHHHHHHHHHHHHHHHHHH PSIPRED ccccccccHHHcccEEEEcccHHHHHHHHHHHcccEEEEEEEccEEEEEEEEccEEEEEEEccccHHHHHHHHHHHHHHccccEEEEEEEEEEcccccccccEEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHHHHccccEEEccHHHHHHHHHHccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHc //