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Clostridium perfringens str. 13 (cper0)
Gene : purB
DDBJ      :purB         adenylosuccinate lyase
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  539/915 : Eukaryota  162/199 : Viruses  0/175   --->[See Alignment]
a.127.1
:476 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->462 2vd6A PDBj e-141 57.2 %
:RPS:PDB   11->453 1c3uA PDBj 3e-75 22.0 %
:RPS:SCOP  11->453 1c3cA  a.127.1.1 * 1e-73 22.2 %
:HMM:SCOP  10->454 1c3cA_ a.127.1.1 * 1.6e-101 30.8 %
:RPS:PFM   98->304 PF00206 * Lyase_1 2e-25 39.3 %
:RPS:PFM   369->445 PF10397 * ADSL_C 7e-06 33.8 %
:HMM:PFM   62->303 PF00206 * Lyase_1 1.1e-23 26.9 223/312  
:HMM:PFM   370->452 PF10397 * ADSL_C 2.3e-20 35.1 77/81  
:HMM:PFM   13->58 PF09092 * Lyase_N 0.00013 40.0 35/178  
:BLT:SWISS 5->474 PUR8_MOUSE e-152 55.7 %
:PROS 280->289|PS00163|FUMARATE_LYASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81374.1 GT:GENE purB GT:PRODUCT adenylosuccinate lyase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1942405..1943835) GB:FROM 1942405 GB:TO 1943835 GB:DIRECTION - GB:GENE purB GB:PRODUCT adenylosuccinate lyase GB:NOTE 476 aa, similar to sp:PUR8_MOUSE ADENYLOSUCCINATE LYASE (EC 4.3.2.2) (ADENYLOSUCCINASE) (ASL) (ASASE) from Mus musculus (484 aa); 55.7% identity in 470 aa overlap. 1 putative transmembrane region was found by PSORT CPE1668 GB:PROTEIN_ID BAB81374.1 LENGTH 476 SQ:AASEQ MKNLYSTPLNSRYASKEMSYIFSDDMKFSTWRKLWVALAEGEKELGLNITDEQIEELKSHISDINYEEAIKKEKEVRHDVMSHVYAYGLQCPSAKGIIHLGATSCYVGDNTDVIIMRDALLLIKKKIVAVLNNLKRFALEYKDMPTLGFTHFQPAQLTTVGKRATLWMQDLVMDMENIDFLLSTLKLRGVKGTTGTQASFMNLFEGDEEKVKALDKIVAEKMGFKKSFGVTGQTYPRKLDSIILNTLSEIAQSAYKFSNDLRLLQSMKEIEEPFEKNQIGSSAMAYKRNPMRSERMGALARYVIVDALNPAITASTQWFERTLDDSANKRIAVAEAFLALDGVLYLYINIAENMVVYDKVIEAHVNQELPFMATENIMMESVKKGGDRQELHERIRVHSMDAAQRVKGEGLNNDLIERIINDPSFNLSKEEIIAIIDPVKFVGRAPSQVVEFIDEYVNPIIEANKDAASLSSDITV GT:EXON 1|1-476:0| BL:SWS:NREP 1 BL:SWS:REP 5->474|PUR8_MOUSE|e-152|55.7|470/484| PROS 280->289|PS00163|FUMARATE_LYASES|PDOC00147| SEG 119->131|alllikkkivavl| BL:PDB:NREP 1 BL:PDB:REP 5->462|2vd6A|e-141|57.2|449/461| RP:PDB:NREP 1 RP:PDB:REP 11->453|1c3uA|3e-75|22.0|419/423| RP:PFM:NREP 2 RP:PFM:REP 98->304|PF00206|2e-25|39.3|196/302|Lyase_1| RP:PFM:REP 369->445|PF10397|7e-06|33.8|71/81|ADSL_C| HM:PFM:NREP 3 HM:PFM:REP 62->303|PF00206|1.1e-23|26.9|223/312|Lyase_1| HM:PFM:REP 370->452|PF10397|2.3e-20|35.1|77/81|ADSL_C| HM:PFM:REP 13->58|PF09092|0.00013|40.0|35/178|Lyase_N| GO:PFM:NREP 1 GO:PFM GO:0003824|"GO:catalytic activity"|PF00206|IPR000362| RP:SCP:NREP 1 RP:SCP:REP 11->453|1c3cA|1e-73|22.2|418/424|a.127.1.1| HM:SCP:REP 10->454|1c3cA_|1.6e-101|30.8|425/429|a.127.1.1|1/1|L-aspartase-like| OP:NHOMO 834 OP:NHOMOORG 754 OP:PATTERN --11--1111111111--111111--------111111111111111111111111111111111-11 1111111111111111111-111111111111111111211111----------------32211111111-1111111111111111-----------11-11---11----------------11111111111-----111-111111111111111111111111111111111111111111111-11111111111111111121111111111111111111111111111111111111111111111111111111111112111111111111-11111111111111111111111111111111211111111-111111111111111111111-1-11111122111121111111111111111111111112111111211111111111111-11111211211111111121111111111111111111111111111111111121111111111---------------1111111111----------------------------1--1--------1--1112-1----------------------111-1111111111111111111111111111112112222121111111111111111---------------------------------------------11----------------------------------1-22--2---------------------------------------------------------------------------------1-2212-------------111111111-1------------------------------1111111---1-111--1----1---1--------11------1-11111111111 ------------11112111111131111111111111111111111111133222111111111111112111111-1111111111-1312111111111-112---12-411111111111111116E1-211111111131111111111121112311111111-112211---------1---1--1-1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 466 STR:RPRED 97.9 SQ:SECSTR ccGGccccccGGGccTTTGGGGcHHHHHHHHHHHHHHHHHHHHHTTcTccTTHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHHHGGGGGGTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcEEccccTTccccccccccHHHHHHHHHHTTcEEcccTcEEccccccccccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTccEETTccEEcccccccTTccccHHHHHHHHHHHHHHHHTHHHHHHTccccTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHTTTTTGGGHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHTcccTccHHHHHHTcHHHHccHHHHHGGGcTHHHHTTHHHHHHTTcHHHHHHHHccccc########## DISOP:02AL 1-2| PSIPRED cccccccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHccHHHcccHHHHHHHHHHHHHHHHHHHcHHHHcccccccc //