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Clostridium perfringens str. 13 (cper0)
Gene : spoIIIAA
DDBJ      :spoIIIAA     stage III sporulation protein AA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  121/915 : Eukaryota  17/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.144.1
:294 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   129->188 1jbkA PDBj 3e-05 33.3 %
:RPS:PDB   166->261 1dmaB PDBj 3e-08 11.2 %
:RPS:SCOP  3->143 1cjaA  d.144.1.3 * 1e-27 17.4 %
:RPS:SCOP  139->261 1p9rA  c.37.1.11 * 1e-08 23.1 %
:HMM:SCOP  2->276 1p9rA_ c.37.1.11 * 1.3e-14 21.0 %
:RPS:PFM   139->261 PF00437 * GSPII_E 2e-04 26.8 %
:HMM:PFM   136->171 PF00006 * ATP-synt_ab 0.00012 25.0 36/215  
:BLT:SWISS 1->293 SP3AA_BACSU 3e-64 41.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81539.1 GT:GENE spoIIIAA GT:PRODUCT stage III sporulation protein AA GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2107599..2108483) GB:FROM 2107599 GB:TO 2108483 GB:DIRECTION - GB:GENE spoIIIAA GB:PRODUCT stage III sporulation protein AA GB:NOTE 294 aa, similar to sp:S3AA_BACSU STAGE III SPORULATION PROTEIN AA from Bacillus subtilis (307 aa); 40.3% identity in 293 aa overlap CPE1833 GB:PROTEIN_ID BAB81539.1 LENGTH 294 SQ:AASEQ MKEIFAVLPDKINSCLKDKSNLNKLQEIRVKVGKPLNIVLDNTETIFNYVIRREDVKAIIQKISNYSLYAFEEDIRQGYITIQGGHRVGLAGQCVIEDNSIKTIRNITSLNIRVCREIVGCSNSLMNSLVENNRVNNTLIISPPKCGKTTLLRDITRNISNGISQIGLKGKRTVVIDERSEIAACYNGIPQMNVGMRTDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRRPVFREIVENNIINKVVVLSGKKGIGTIEGIYNV GT:EXON 1|1-294:0| BL:SWS:NREP 1 BL:SWS:REP 1->293|SP3AA_BACSU|3e-64|41.0|290/307| SEG 266->278|eivenniinkvvv| BL:PDB:NREP 1 BL:PDB:REP 129->188|1jbkA|3e-05|33.3|60/189| RP:PDB:NREP 1 RP:PDB:REP 166->261|1dmaB|3e-08|11.2|89/189| RP:PFM:NREP 1 RP:PFM:REP 139->261|PF00437|2e-04|26.8|112/273|GSPII_E| HM:PFM:NREP 1 HM:PFM:REP 136->171|PF00006|0.00012|25.0|36/215|ATP-synt_ab| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 2 RP:SCP:REP 3->143|1cjaA|1e-27|17.4|132/327|d.144.1.3| RP:SCP:REP 139->261|1p9rA|1e-08|23.1|108/378|c.37.1.11| HM:SCP:REP 2->276|1p9rA_|1.3e-14|21.0|248/401|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 172 OP:NHOMOORG 138 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------11111111111111111111111111111111111-1-----1-----1---11-111111111111111111111111111111-1--------11------------------------------------------------------------------------------------------11111111111111111111111111--11121111111121111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------31-----------------------------------------------------------------431I221111212-42------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 133 STR:RPRED 45.2 SQ:SECSTR ################################################################################################################################HHTccccccccEEccTTccHHHHHHHHHHHcccTTccccccccccccTTcccTccHHHHHHHHHHHHTTTEEEEHHHHHHEEEEEEHHHHHHHHHHHccccccTTcTTccEEEcccHHHHTTccccccEEEEE################################# PSIPRED cHHHHHHccHHHHHHHHHccccccEEEEEEEccccEEEEEccccEEEEccccHHHHHHHHHHHHHHccHHHHHHccccEEEEccccEEEEEcccccccccEEEEEccccccEEEEccHHccHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHccccHHcccccccEEEEEcHHHHHHccccccHHHcccHHHcccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHccccEEEEEccccHHHHHHcHHHHHHHHccccEEEEEEcccccccEEEEEEEc //