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Clostridium perfringens str. 13 (cper0)
Gene : spoVE.2
DDBJ      :spoVE        stage V sporulation protein E
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  770/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:374 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   19->371 PF01098 * FTSW_RODA_SPOVE 4e-39 31.6 %
:HMM:PFM   19->370 PF01098 * FTSW_RODA_SPOVE 4.3e-92 36.6 347/359  
:BLT:SWISS 15->371 RODA_HAEIN 2e-35 28.2 %
:PROS 327->351|PS00428|FTSW_RODA_SPOVE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81842.1 GT:GENE spoVE.2 GT:PRODUCT stage V sporulation protein E GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(2446824..2447948) GB:FROM 2446824 GB:TO 2447948 GB:DIRECTION - GB:GENE spoVE GB:PRODUCT stage V sporulation protein E GB:NOTE 374 aa, similar to gp:SCY14206_5 sfr gene product from Streptomyces coelicolor A3(2) (372 aa); 29.3% identity in 355 aa overlap. Putative N-terminal signal sequence and 9 putative transmembrane regions were found by PSORT. CPE2136 GB:PROTEIN_ID BAB81842.1 LENGTH 374 SQ:AASEQ MLSRLKLDSKLRREIDYKLLVSMILIVLFGILNIYLGTKSQRGFFFAKKQLIWFIISMAALYIILLWNYNIIYNYVEIFYWGSIVLLIITRFAGSVINGARGWIVLGPVSIQPSELAKTAMILMLAKKMEQVDLRINDFRNFIKVAMYAIIPMIFIVVQPDMGMTMVSFFIALGIFFAAGLDMKVIGAGLLSIIVAIALVWNSGLIKDYQKDRLVGFLNPDGDELGINLQLTQSKIGIGSGGFFGTGLDLNGEVGGYSSEFVPERQTDFIFAVIGEHWGTVGGIVLLLLYAIMIYRIIMTAKTSKDIFGSIICVGFASYFIFAILQNIGMTIGIMPITGITLPLVSYGGSSLLTTIVSIALVLNISMRKKKLKF GT:EXON 1|1-374:0| BL:SWS:NREP 1 BL:SWS:REP 15->371|RODA_HAEIN|2e-35|28.2|348/371| PROS 327->351|PS00428|FTSW_RODA_SPOVE|PDOC00352| TM:NTM 8 TM:REGION 16->38| TM:REGION 50->72| TM:REGION 74->96| TM:REGION 139->161| TM:REGION 174->196| TM:REGION 273->295| TM:REGION 315->337| TM:REGION 346->367| SEG 2->13|lsrlkldsklrr| SEG 61->75|lyiillwnyniiyny| SEG 169->181|ffialgiffaagl| SEG 236->247|igigsggffgtg| SEG 328->341|igmtigimpitgit| RP:PFM:NREP 1 RP:PFM:REP 19->371|PF01098|4e-39|31.6|348/357|FTSW_RODA_SPOVE| HM:PFM:NREP 1 HM:PFM:REP 19->370|PF01098|4.3e-92|36.6|347/359|FTSW_RODA_SPOVE| GO:PFM:NREP 2 GO:PFM GO:0007049|"GO:cell cycle"|PF01098|IPR001182| GO:PFM GO:0016021|"GO:integral to membrane"|PF01098|IPR001182| OP:NHOMO 1377 OP:NHOMOORG 771 OP:PATTERN -------------------------------------------------------------------- 22212-1-111-21111----1111------12---12111211---12------1-111--2---122321------3111222222---111112--211111111211--------1111111221222211122223---211112221111111121111112222111212112212-----11233444545445454454443554145433343225555553212222222222222222222313222222222322221111121111111222-2211111111111111111111111111122211112442333333333343222333323322223224332222221333211212-2111111111-111111--11111111111111-11-111111-1----1----------1111111111111111111111111111222--------11222222222222211111221122222212222122222222222222122221222112212-222-2222112221221-------1121122112121122222122222222112112222211121-----12-222212212121222222122222222222223222222322221-211111-----22122222222222222-2232222222222122222222222222222222222222222222222222122222222222221221111122222212222222222222211122222222222222222222122222222111111111233322222233122332222222221111121111111--------11--------------------------21211-1121221 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5| PSIPRED ccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccEEcHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccEEEcccccHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHccHHHHHHHHHHHHHHHHHHHHcccccc //