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Clostridium perfringens str. 13 (cper0)
Gene : thrS
DDBJ      :thrS         threonine-tRNA ligase
Swiss-Prot:SYT_CLOPE    RecName: Full=Threonyl-tRNA synthetase;         EC=6.1.1.3;AltName: Full=Threonine--tRNA ligase;         Short=ThrRS;

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.116.1c.51.1d.104.1d.15.10d.67.1
:643 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->638 1nyrA PDBj e-150 42.4 %
:RPS:PDB   74->560 2cimB PDBj 5e-58 12.1 %
:RPS:SCOP  2->59 1nyqA2  d.15.10.1 * 2e-14 41.4 %
:RPS:SCOP  61->239 1nyqA3  d.67.1.1 * 7e-39 39.1 %
:RPS:SCOP  239->537 1evkA2  d.104.1.1 * 1e-92 36.6 %
:RPS:SCOP  516->640 1o6dA  c.116.1.3 * 1e-24 10.4 %
:HMM:SCOP  2->62 1qf6A2 d.15.10.1 * 8.8e-15 45.9 %
:HMM:SCOP  63->238 1qf6A3 d.67.1.1 * 4.1e-62 50.6 %
:HMM:SCOP  240->532 1nyrA4 d.104.1.1 * 9.6e-84 38.8 %
:HMM:SCOP  535->640 1nj1A1 c.51.1.1 * 4.8e-32 42.5 %
:RPS:PFM   2->61 PF02824 * TGS 2e-06 35.0 %
:RPS:PFM   172->216 PF07973 * tRNA_SAD 2e-05 60.5 %
:RPS:PFM   271->414 PF00587 * tRNA-synt_2b 4e-17 34.0 %
:RPS:PFM   550->636 PF03129 * HGTP_anticodon 2e-11 34.5 %
:HMM:PFM   275->442 PF00587 * tRNA-synt_2b 3.3e-42 31.1 164/173  
:HMM:PFM   547->634 PF03129 * HGTP_anticodon 4.4e-26 45.5 88/94  
:HMM:PFM   167->216 PF07973 * tRNA_SAD 1.1e-14 37.2 43/44  
:HMM:PFM   2->61 PF02824 * TGS 3.2e-09 23.3 60/60  
:BLT:SWISS 1->643 SYT_CLOPE 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB82028.1 GT:GENE thrS GT:PRODUCT threonine-tRNA ligase GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION 2670843..2672774 GB:FROM 2670843 GB:TO 2672774 GB:DIRECTION + GB:GENE thrS GB:PRODUCT threonine-tRNA ligase GB:NOTE 643 aa, similar to sp:SYT1_BACSU THREONYL-TRNA SYNTHETASE 1 (EC 6.1.1.3) (THREONINE-TRNA LIGASE) (THRRS) from Bacillus subtilis (643 aa); 45.1% identity in 638 aa overlap CPE2322 GB:PROTEIN_ID BAB82028.1 LENGTH 643 SQ:AASEQ MIKITLKDGSIKEVEAGLSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEICTFDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNGFYYDFDTEKPFSADQLNKLEEEMKKIIKENPEIKRFELPRNEALELMKDEPYKVELINDLPEGEVISFYQIGDFVDLCAGPHLMAVKPIKAVKLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLEALEEAKKRDHNKLGRELGIFTTDENVGQGLPLLMPKGARIIQTLQRWIEDEEQRRGYVLTKTPLMAKSDLYKISGHWDHYKDGMFVLGDEEKDSEVFALRPMTCPFQYAIYNSTQHSYRDLPVRFAETSTLFRNESSGEMHGLIRVRQFTLADGHIVCTPEQLEDEFKNTVDLVKYVMETLGIADDITYRFSKWDPNNTEKYINDPEAWENTQNIMREILNHLNIDFTEADDEAAFYGPKLDIQFKNVHGKEDTIITIQIDFALAERFGMYYIDKDGEKKRPYIIHRSSIGCYERTLAMLIEKYAGALPTWIAPVQAKVLPLSDKYADYANEVVEELRRRGVRVEADHRAEKIGYKIREARLERTPYILVVGEKEAENKEVSVRSRKNGEEGAMPLADFVNRIVLEIANREN GT:EXON 1|1-643:0| SW:ID SYT_CLOPE SW:DE RecName: Full=Threonyl-tRNA synthetase; EC=6.1.1.3;AltName: Full=Threonine--tRNA ligase; Short=ThrRS; SW:GN Name=thrS; OrderedLocusNames=CPE2322; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->643|SYT_CLOPE|0.0|100.0|643/643| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 119->135|kleeemkkiikenpeik| SEG 225->236|eldaylealeea| SEG 563->576|evveelrrrgvrve| BL:PDB:NREP 1 BL:PDB:REP 2->638|1nyrA|e-150|42.4|635/642| RP:PDB:NREP 1 RP:PDB:REP 74->560|2cimB|5e-58|12.1|439/477| RP:PFM:NREP 4 RP:PFM:REP 2->61|PF02824|2e-06|35.0|60/60|TGS| RP:PFM:REP 172->216|PF07973|2e-05|60.5|38/44|tRNA_SAD| RP:PFM:REP 271->414|PF00587|4e-17|34.0|141/170|tRNA-synt_2b| RP:PFM:REP 550->636|PF03129|2e-11|34.5|87/91|HGTP_anticodon| HM:PFM:NREP 4 HM:PFM:REP 275->442|PF00587|3.3e-42|31.1|164/173|tRNA-synt_2b| HM:PFM:REP 547->634|PF03129|4.4e-26|45.5|88/94|HGTP_anticodon| HM:PFM:REP 167->216|PF07973|1.1e-14|37.2|43/44|tRNA_SAD| HM:PFM:REP 2->61|PF02824|3.2e-09|23.3|60/60|TGS| GO:PFM:NREP 14 GO:PFM GO:0005524|"GO:ATP binding"|PF07973|IPR012947| GO:PFM GO:0005737|"GO:cytoplasm"|PF07973|IPR012947| GO:PFM GO:0006412|"GO:translation"|PF07973|IPR012947| GO:PFM GO:0016876|"GO:ligase activity, forming aminoacyl-tRNA and related compounds"|PF07973|IPR012947| GO:PFM GO:0043039|"GO:tRNA aminoacylation"|PF07973|IPR012947| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 4 RP:SCP:REP 2->59|1nyqA2|2e-14|41.4|58/59|d.15.10.1| RP:SCP:REP 61->239|1nyqA3|7e-39|39.1|179/179|d.67.1.1| RP:SCP:REP 239->537|1evkA2|1e-92|36.6|290/291|d.104.1.1| RP:SCP:REP 516->640|1o6dA|1e-24|10.4|125/147|c.116.1.3| HM:SCP:REP 2->62|1qf6A2|8.8e-15|45.9|61/0|d.15.10.1|1/1|TGS-like| HM:SCP:REP 63->238|1qf6A3|4.1e-62|50.6|176/179|d.67.1.1|1/1|ThrRS/AlaRS common domain| HM:SCP:REP 240->532|1nyrA4|9.6e-84|38.8|291/291|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 535->640|1nj1A1|4.8e-32|42.5|106/127|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 1694 OP:NHOMOORG 1171 OP:PATTERN 11111111222222211111111111111111211111111111111111111111111111121111 1111211111111111111-11111111111111112211122212112111111112112211112121111111111112112222111111111--1111111111111111111111111211111211121111111111133111121111111111111122211111111111211111111111122222222222222221222222211121111111111211111111111111121121112122111111122221212112221112111111222222222222222222222212122222222211112111111111221111111212111111111111111111111122111111111111111211111111111111111111-11111111111111111111111111111112111111111111111111111112211111111111111111111111111111111122222111112211111121111111221222211222211111111112231112211111111111221211111112111111111111111111121111111211111211111111111111111112111121212222111111111111111-1111111111121111211111111111-11111111111111111111121121111111111111111111111111111111111111111212111111111111212111121111111111111111111111111112111111111111111111111111211111211112111111111111111111111111111111111111111-11111111111111111111111121222111 1111222-311122211222222222222222222122222222222222222212222222222222222122222-2322222222-1311111111111222212B324734643323333573639T3-66B3333933442334333494433213A11121311512322222F2222242442432252223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 642 STR:RPRED 99.8 SQ:SECSTR #ccccccccTTcccccEETTEEEEEEEccTHHHHccETcccEEEEccGGGcEEEEEEEEEEccccGGGHHHHHcccccEEEEEEEEccccccTTHHHHHHHHHHHHTGGGTTccTTcccEEEEEccEEEEEEEEcccccHHHHHHHHHHHHHHHHTTTccEEEEEEEEEEEccccccccccTTEEEEEEETTEEEEEEcccHHHHHHHTTHHHHHHHHHHHHHHHTcccEEEEEEcccccccccccHHHHHHHHTcccTTcEEEcHHHHHHHHHHHHHHHHHTHHHTcEEcccccEEEHHHHHHHcGGGTcGGGccHHHHHHcccccEEEcccccGGGGGTTTTcEEcGGGccEEEEEcccEEEcccccccccTTcccEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTcccccEEEEEEccccEEEEEEEccGGGcTGGGcTTcccTTcccEEEEEEEEEETHHHHHHTcEETTccccEEEEEEEEHHHHHHHHHHHHcEcccccTTcccEEEEEEEEEHHHHHHHHHHHHcccGGGccHHHHHHHccccccccccHHHHHHHHHTTTcccEEEcccccHHHHHHHHHHTTccEEEEEcHHHHTccTEEEEETTTccEEEEEHHHHHHHHHHHcEHEEE DISOP:02AL 201-210, 641-643| PSIPRED ccEEEEccccEEEEcccccHHHHHHHcccccccEEEEEEEccEEEEcccccccccEEEEEEccccHHHHHHHccHHHHHHHHHHHHccccEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccEEEEEEcHHHHHHHHccccccEEEEEccccccEEEEEEEccEEEEcccccccccccccEEEEEEcccccccccccccEEEEEEEEccccHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHccccEEEcccHHHHHHHHHHHHHHHHHHcccEEEEcccEEcHHHHHHcccccccccccEEEccccccccEEEEEcccHHHHHHHHHHccccHHHccEEEEEEccEEEEcccccccccEEEEEEEEEcEEEEEcHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccHHEEEEHHHHHHHHHHHHHHHHHccccccccccccHHHHccEEEEEccccccccEEEEEEEEEEEEEEEEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHHccccccccccEEEEEEEccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccEEEEEccccHHccEEEEEEccccEEEEEcHHHHHHHHHHHHHHHcc //