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Clostridium perfringens str. 13 (cper0)
Gene : uapC
DDBJ      :uapC         probable transporter
Swiss-Prot:Y397_CLOPE   RecName: Full=Putative purine permease CPE0397;

Homologs  Archaea  17/68 : Bacteria  547/915 : Eukaryota  138/199 : Viruses  0/175   --->[See Alignment]
:452 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   26->398 PF00860 * Xan_ur_permease 5e-23 29.6 %
:HMM:PFM   25->401 PF00860 * Xan_ur_permease 1.8e-100 38.6 373/389  
:BLT:SWISS 1->452 Y397_CLOPE 0.0 100.0 %
:PROS 349->369|PS01116|XANTH_URACIL_PERMASE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB80103.1 GT:GENE uapC GT:PRODUCT probable transporter GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(511369..512727) GB:FROM 511369 GB:TO 512727 GB:DIRECTION - GB:GENE uapC GB:PRODUCT probable transporter GB:NOTE 452 aa, similar to sp:YCPX_CLOPE HYPOTHETICAL PROTEIN IN CPE 5'REGION (FRAGMENT) from Clostridium perfringens (311 aa); 88.2% identity in 306 aa overlap. Also similar to many permeases. 11 putative transmembrane regions were found by PSORT. CPE0397 GB:PROTEIN_ID BAB80103.1 LENGTH 452 SQ:AASEQ MEKQNLKNTEVNLIYGVDDDLDLPKKVLFGLQHIFAAFGGIIVVPLVIATSLGFDSKVTTALISASILGSGLATIIQAKGVGKVGARVACIMGTDFTFVSPAISVGSVLGLPGIIGATILGSLFEVILSFFIKPLMKFFPPLVTGTVVALIGLTLLPVSIDWAAGGAGSANYASLENLAVAMFVLVITLLLNNYGKGMISSASILIGIVVGYIVCIPLGLVDFTPVKEASWLSFPKILEFGVTFDAKAVMAFIPAYFVATIGTVGCLKAIGETSNIDIGDKRVAAGVLSDGVGSALGGLVGSCPNTSFSQNIGIISLTKVASRHVAVMAGILLVILGFLPKVAAIITGIPNPVLGGVGIMMFGTVAAAGIRTLSNIKLTERNLLIIAISMGLGLGVTFRPDVIHNLPEAIRMIFSSGISTGTIAALILNAVLKESPTSMEFENMYDEEKKAS GT:EXON 1|1-452:0| SW:ID Y397_CLOPE SW:DE RecName: Full=Putative purine permease CPE0397; SW:GN Name=cpx; OrderedLocusNames=CPE0397; SW:KW Cell membrane; Complete proteome; Membrane; Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->452|Y397_CLOPE|0.0|100.0|452/452| GO:SWS:NREP 4 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 349->369|PS01116|XANTH_URACIL_PERMASE|PDOC00860| TM:NTM 11 TM:REGION 30->52| TM:REGION 58->80| TM:REGION 85->107| TM:REGION 112->134| TM:REGION 139->161| TM:REGION 173->195| TM:REGION 200->222| TM:REGION 248->270| TM:REGION 313->335| TM:REGION 355->377| TM:REGION 412->434| SEG 18->23|dddldl| SEG 163->168|aaggag| SEG 286->302|gvlsdgvgsalgglvgs| RP:PFM:NREP 1 RP:PFM:REP 26->398|PF00860|5e-23|29.6|365/381|Xan_ur_permease| HM:PFM:NREP 1 HM:PFM:REP 25->401|PF00860|1.8e-100|38.6|373/389|Xan_ur_permease| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF00860|IPR006043| GO:PFM GO:0006810|"GO:transport"|PF00860|IPR006043| GO:PFM GO:0016020|"GO:membrane"|PF00860|IPR006043| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00860|IPR006043| OP:NHOMO 1554 OP:NHOMOORG 702 OP:PATTERN ------------------------2---211-1-----11111--1-1------11--111------- ----1222222-211---------14------1111-432------3-1--12124------1-1123341322233311211-----2221-122----------------------------------1-1--1----------1--------------1----------------------2111---1122222233222323431133242231222222222222232222222222222222222242322223222222222223122222222211121122222222222222222222222211123111121432344434334451511133321-321221-11122-11121111-1--------------1211----------11-111112-22121111-----11-------3421---114----11111111111-1111--------------------------------------211113445433233344423333335326563--2211112251112--7-----121222222-------12-3112111111-1-11-1---1111--11-111------1----------------41111-2-1111111111311111111111--1----------23224335555545555-555555555554555555244422212323333333332323333234444--311121111222--------------112122222221111111133323351311-55554665445461222----------12242222222122-----------------1--------------1------1--------------------1-11111111--- ----12---------121121111211111111-------2---11-111111111111111211111-1--111-----1-111111-1112111111---2444--4-7757532111-13---1226K41223--1-3223222-1-31-31232359D1F22-11-48575-53-H---21523722431----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-15, 437-452| PSIPRED cccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccccccccc //