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Clostridium perfringens str. 13 (cper0)
Gene : uraA.2
DDBJ      :uraA         probable uracil permease
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  554/915 : Eukaryota  124/199 : Viruses  0/175   --->[See Alignment]
:432 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   25->392 PF00860 * Xan_ur_permease 2e-25 34.6 %
:HMM:PFM   26->395 PF00860 * Xan_ur_permease 1.7e-102 37.2 368/389  
:BLT:SWISS 16->426 URAA_ECOLI e-115 52.8 %
:PROS 343->363|PS01116|XANTH_URACIL_PERMASE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB81211.1 GT:GENE uraA.2 GT:PRODUCT probable uracil permease GT:DATABASE GIB00075CH01 GT:ORG cper0 GB:ACCESSION GIB00075CH01 GB:LOCATION complement(1757210..1758508) GB:FROM 1757210 GB:TO 1758508 GB:DIRECTION - GB:GENE uraA GB:PRODUCT probable uracil permease GB:NOTE 432 aa, similar to sp:URAA_ECOLI URACIL PERMEASE (URACIL TRANSPORTER) from Escherichia coli (429 aa); 54.7% identity in 411 aa overlap. 12 putative transmembrane regions were found by PSORT. CPE1505 GB:PROTEIN_ID BAB81211.1 LENGTH 432 SQ:AASEQ MTESVQNKEVELLEVIGVEDKLPLKKAIPLSVQHLFAMFGSSVLVPILLNIDPATVLFFNGIGTLLYAFITKRKIPAYLGSSFAFISPVLLLMGEGYSFTEVQSGFVVSGLLFATIAIIVGFVGTGWIRKLFPPASMGAIVTIIGLELAPTAADMAGFPVGLSNSKVLNPTWVLVSMITIITVILASVLLRGFLKVIPILIGIVTGYLVSCFLGLVDFTQVKEASLFVLPQIHIAKPSLNAILTILPATFVVVAEHVGHLVVTSSIVGKDLSKDPGLNRSLLGDGLSTMISGFFGSVPTTTYGENIGVMALTKVYSSYVICGAGVLSVILGFSGSLSALIRSIPTPVIGGVSLLLFGTIATSGLRTFIEEKVDYSKSKNLILTSVTMIVGLSNIAVRFGAIEIKGMGLATIVAMILSISFMIFDKLGLMNEK GT:EXON 1|1-432:0| BL:SWS:NREP 1 BL:SWS:REP 16->426|URAA_ECOLI|e-115|52.8|407/429| PROS 343->363|PS01116|XANTH_URACIL_PERMASE|PDOC00860| TM:NTM 11 TM:REGION 40->62| TM:REGION 76->98| TM:REGION 103->125| TM:REGION 138->160| TM:REGION 180->202| TM:REGION 236->258| TM:REGION 283->304| TM:REGION 312->334| TM:REGION 346->368| TM:REGION 380->402| TM:REGION 406->428| SEG 251->262|vvvaehvghlvv| RP:PFM:NREP 1 RP:PFM:REP 25->392|PF00860|2e-25|34.6|356/381|Xan_ur_permease| HM:PFM:NREP 1 HM:PFM:REP 26->395|PF00860|1.7e-102|37.2|368/389|Xan_ur_permease| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF00860|IPR006043| GO:PFM GO:0006810|"GO:transport"|PF00860|IPR006043| GO:PFM GO:0016020|"GO:membrane"|PF00860|IPR006043| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00860|IPR006043| OP:NHOMO 1463 OP:NHOMOORG 695 OP:PATTERN ------------------------2---211-1-----11111--1-1------11--111------- ----2222222-211------1--14------2111-443----1131111122241-----111133341322232211211-----2221-122----------------------------------1-1--1----------1--------------1---------------------11212---1122222222222222221122242221122222222222222222222222222222222242322223222222222223122222222211121122222222222222222222222212112111121432344434334451511133321-321221-11111-11121111-1--------------1211----------11-111112-22221111-----11-------3411---114----11111111111---11--------------------------------------211113445432111133422222225226563--2211112251112--7-----121222222-------11-3112111111-1-11-1---1111-----111------1----------1-----41111-2-1111111111311111111111--1----------23224335555545655-555555555554555555244422212222222222222222233234444--311121111222--------------112122222221111111122232251311-44444665445461222----------12252222222122-----------------1--------------1-1----1--------------------1-11111111--- ----22----------2112111111--1-----------1----1-111--1--1111111-11111-1--111-------111111-1112111111---2443--3-775744-111-13-121225J41223--11211322211-31-31233359B1A42-11-46343-12-H---215--422131----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-13, 430-432| PSIPRED ccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHHHHcccccHHHcccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc //