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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48556.1
DDBJ      :             DNA replication and repair protein RecF
Swiss-Prot:RECF_DESRM   RecName: Full=DNA replication and repair protein recF;

Homologs  Archaea  0/68 : Bacteria  652/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->366 2o5vA PDBj 9e-34 29.7 %
:RPS:PDB   1->67 1e69A PDBj 4e-09 23.9 %
:RPS:SCOP  1->93 1f2t.1  c.37.1.12 * 6e-15 22.6 %
:HMM:SCOP  1->352 1w1wA_ c.37.1.12 * 1.7e-37 27.6 %
:RPS:PFM   3->190 PF02463 * SMC_N 1e-06 30.6 %
:HMM:PFM   3->342 PF02463 * SMC_N 5.9e-17 26.4 174/220  
:BLT:SWISS 1->371 RECF_DESRM 0.0 100.0 %
:PROS 114->134|PS00617|RECF_1
:PROS 309->327|PS00618|RECF_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48556.1 GT:GENE ABO48556.1 GT:PRODUCT DNA replication and repair protein RecF GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 3256..4371 GB:FROM 3256 GB:TO 4371 GB:DIRECTION + GB:PRODUCT DNA replication and repair protein RecF GB:NOTE TIGRFAM: DNA replication and repair protein RecF PFAM: SMC domain protein KEGG: bcz:BCZK0004 DNA replication and repair protein GB:PROTEIN_ID ABO48556.1 GB:DB_XREF GI:134050585 InterPro:IPR001238 InterPro:IPR003395 LENGTH 371 SQ:AASEQ MRVKKLSLRNFRNYKEAQFIPHPSINIITGPNAQGKTNLLEAIYYSLRGCSFRAEKDRDVTNWESNHTVINTEVNLSSRLIKLQWKIQEGSKKLSLNGVERPRSELDLFGVVLFCPEDLSLIKGSPQERRHFLDYEVGTLSPGYSQLWRQYAKILSQRNSLLKEIRDHRSKQEVLEVWDEQLYRYGAKVIYLRLQVLKKLIPIARKTHFGLTGGTEELQAKYLSSLVLEPGLSEGQIYQVFSSSSKKIRQMELKRCQTLLGPHRDDLSLAINGVEAKTFGSQGQQRTVTLSLKLSQLDLWYHEFGEYPVLLLDDVLFELDRSRQNMLIDKILNKVQTFITTSFTGGIEETIKGAGLLWQVNAGSLTQKEEF GT:EXON 1|1-371:0| SW:ID RECF_DESRM SW:DE RecName: Full=DNA replication and repair protein recF; SW:GN Name=recF; OrderedLocusNames=Dred_0004; SW:KW ATP-binding; Complete proteome; Cytoplasm; DNA damage; DNA repair;DNA replication; DNA-binding; Nucleotide-binding; SOS response. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->371|RECF_DESRM|0.0|100.0|371/371| GO:SWS:NREP 8 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0009432|"GO:SOS response"|SOS response| PROS 114->134|PS00617|RECF_1|PDOC00539| PROS 309->327|PS00618|RECF_2|PDOC00539| SEG 309->316|vlllddvl| BL:PDB:NREP 1 BL:PDB:REP 1->366|2o5vA|9e-34|29.7|343/358| RP:PDB:NREP 1 RP:PDB:REP 1->67|1e69A|4e-09|23.9|67/263| RP:PFM:NREP 1 RP:PFM:REP 3->190|PF02463|1e-06|30.6|183/536|SMC_N| HM:PFM:NREP 1 HM:PFM:REP 3->342|PF02463|5.9e-17|26.4|174/220|SMC_N| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 1 RP:SCP:REP 1->93|1f2t.1|6e-15|22.6|93/288|c.37.1.12| HM:SCP:REP 1->352|1w1wA_|1.7e-37|27.6|315/0|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 656 OP:NHOMOORG 652 OP:PATTERN -------------------------------------------------------------------- ----111111111111112-111111111111111111111111111111111111111111111111111111111111111-----111111111--111111111111111111111--2-11111111111111111---1111111111111111111111111111111111111111111122-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111------11111-------------11111111111---------1--1-111---------------1----1--11111111---1-1--11--------1111111111111111-11-11--1-----------------------------------------------------------------------1--------------111111111--1-1------------------------------111111111111111111111111111111--11-11------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111---1111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111--11111111---1-111111-------------------------1----------11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 349 STR:RPRED 94.1 SQ:SECSTR cEEEEEEEEccTTccccEEEccccEEEEEccTTTccTHHHHHHHHTcccccTTcccccTTcccccEEEEEEEEEEETTEEEEEEEEEETTEEEEEETTEEEcGGGcccccEEEEcTTTTHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTHHHHHTcGGGTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH###########HHHHHTTccccEEEEEEccccTTTHHHHHHHTHHHHHHHTcccccGGGcEEEEEETTEEHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccGGGcccHHHHHHHHHHHHHccEEEEEEc######cccTTccEEEEEETTEEE##### DISOP:02AL 366-372| PSIPRED cEEEEEEEEccEEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHccccEEEEEEEEEEcccEEEEEEEEEcccEEEEEccccHHHHHHHHccEEEEccccHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEHHHHHHHccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHcccccEEEEEccEEEEEccc //