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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48570.1
DDBJ      :             phage integrase family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  174/915 : Eukaryota  0/199 : Viruses  18/175   --->[See Alignment]
d.163.1
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   58->174 2kkpA PDBj 2e-12 37.9 %
:RPS:PDB   62->383 2a3vB PDBj 2e-23 13.6 %
:RPS:SCOP  63->380 1p7dA  d.163.1.1 * 7e-17 16.8 %
:HMM:SCOP  182->378 1a0pA2 d.163.1.1 * 4e-31 28.7 %
:RPS:PFM   184->368 PF00589 * Phage_integrase 4e-10 31.8 %
:HMM:PFM   183->370 PF00589 * Phage_integrase 6e-26 27.9 165/173  
:BLT:SWISS 10->368 XERCL_THETN 1e-20 26.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48570.1 GT:GENE ABO48570.1 GT:PRODUCT phage integrase family protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(26734..27900) GB:FROM 26734 GB:TO 27900 GB:DIRECTION - GB:PRODUCT phage integrase family protein GB:NOTE PFAM: phage integrase family protein KEGG: chy:CHY_1702 prophage LambdaCh01, site-specific recombinase, phage integrase family GB:PROTEIN_ID ABO48570.1 GB:DB_XREF GI:134050599 InterPro:IPR002104 LENGTH 388 SQ:AASEQ MATIKFNEKKGYYEVRYDAGFDGNGKRIQKYKGGFKKERDAKLFAAQLTVNISQGTHIEPNKMFLFEYLNNWLEEKKETISPTSYCGYEVNIRCHINPYIGGIKLSDLRAAHIRGLYSKLQKAREIKIDGEKRSFKPLSGTSIRYVHRVLSKALEDAYREETIPKNPAKLVTPPTKNKFEAGFLSTKQIREMLDKLREDALYMPVYLSVVLGARRGEVLGLQWSDVDMENKLIHIRHNLIMDNGNPVLREKTKTDSSNRVIVVTDRLIKALKEHKLKLKQKEMKLQHGQLYHKSDFVCTWPDGKPFNPSHLSRSFSLRLQKYGLPNIRFHDLRHSNAALMIAQNVPMKGASDRLGHSTIQITNDLYGHTERSVQEEIAIKIDQAIWGS GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 10->368|XERCL_THETN|1e-20|26.5|343/391| SEG 267->287|likalkehklklkqkemklqh| BL:PDB:NREP 1 BL:PDB:REP 58->174|2kkpA|2e-12|37.9|103/117| RP:PDB:NREP 1 RP:PDB:REP 62->383|2a3vB|2e-23|13.6|302/320| RP:PFM:NREP 1 RP:PFM:REP 184->368|PF00589|4e-10|31.8|157/168|Phage_integrase| HM:PFM:NREP 1 HM:PFM:REP 183->370|PF00589|6e-26|27.9|165/173|Phage_integrase| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 63->380|1p7dA|7e-17|16.8|273/280|d.163.1.1| HM:SCP:REP 182->378|1a0pA2|4e-31|28.7|174/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 343 OP:NHOMOORG 192 OP:PATTERN -------------------------------------------------------------------- -11-12------1-12-----1--2-------12-2---1-367-------2----1----12-1-2322-11114---1-13------1-1--------------------------------------------------12-2-------------------------------------3-1-----1--334343-12221111--3311122--122--1--12-2-41---1131-2212--2-1-82---2-12-2321142-2----243233211-1-11---12--21-11112-321---1-221-11223412121-----14-236331---1-211-121-3-35131-11-315---------------1-1---1------------------1--------1----------------1---------------------------------------------------------------1------------------------------------------------------------------------11------------------------------------------------1----------------1-1------1-------1--------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------1----11----1--111-------1---1-11--1----1---1---------1-1--11-------------------------------------- STR:NPRED 327 STR:RPRED 84.3 SQ:SECSTR #########################################################ccccccHHHHHHHHHHHHTTTGccHHHHHHHHHHHHHHHHTTTTTccGGGccHHHHHHHHHHHHcTTcccHHTccHHHTcccHHHHHHHHHHHHHHHHTcccccccccccccccTTccccccHHTcccHHHHHHHHHHccTTHcHHHHHHHHHHcccHHHHHTccGGGEETTTTEEEEccccTTccEEEEcHHHHHHHccccccccccccHHHHHHcTTGGGcGGGccccEEEEEEEETTTTEEEEEEccHHHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHTTccHHHHHHHcccccHHHHHHHHHHHHHTcTTTcccGGGTc#### DISOP:02AL 1-1| PSIPRED ccEEEEEccccEEEEEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHccEEHHEEEcccEEEEccEEEEcccccEEccccccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHccc //