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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48587.1
DDBJ      :             DEAD/DEAH box helicase domain protein
Swiss-Prot:             

Homologs  Archaea  62/68 : Bacteria  830/915 : Eukaryota  198/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:460 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->360 2db3A PDBj 2e-69 41.6 %
:RPS:PDB   1->356 1cu1A PDBj 1e-71 10.3 %
:RPS:SCOP  17->346 1pjrA1  c.37.1.19 * 9e-57 12.0 %
:HMM:SCOP  69->357 1wp9A2 c.37.1.19 * 2.3e-73 39.2 %
:RPS:PFM   26->186 PF00270 * DEAD 1e-38 49.7 %
:RPS:PFM   260->334 PF00271 * Helicase_C 1e-19 53.3 %
:HMM:PFM   26->189 PF00270 * DEAD 6.8e-55 41.7 163/167  
:HMM:PFM   260->335 PF00271 * Helicase_C 3.1e-31 48.7 76/78  
:BLT:SWISS 1->365 CSHA_GEOKA e-107 50.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48587.1 GT:GENE ABO48587.1 GT:PRODUCT DEAD/DEAH box helicase domain protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 43752..45134 GB:FROM 43752 GB:TO 45134 GB:DIRECTION + GB:PRODUCT DEAD/DEAH box helicase domain protein GB:NOTE PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein SMART: DEAD-like helicases-like KEGG: btl:BALH_2206 ATP-dependent RNA helicase, DEAD/DEAH box family GB:PROTEIN_ID ABO48587.1 GB:DB_XREF GI:134050616 InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR014001 InterPro:IPR014014 InterPro:IPR014021 LENGTH 460 SQ:AASEQ MNDFLQLGIRRELNELLRVYGITEPTPIQKQTIPILLSGKDVIAQAQTGTGKTLAFVLPILEKIDAKKSYIQALILTPTRELALQITTEVKKLASKMDANVLAVYGGQDVERQNKRLQGNTHIVIATPGRLLDHLGRGTIRLTGVSMLVLDEADQMLHMGFLNEVEKIIHQTSAKRQTMLFSATMPAEIRALSVKYMRKPMDIHVRGTGITLEKTKQIAVETTDRTKQETLRKLLDEYQPYLGIIFCRTKRRASALNEMLLAHGYNSDELHGDLSQAKREQVMKRFREAKLQILVATDVAARGLDVEGVTHVFNYDIPQDVESYIHRIGRTGRAGDTGLAVTFVSPRDRTDLQMIEKGIGMKLEKRSAHRQTIQEVPGDKTFVKKSTKEKAGPYSTEKAMKNKKPLNGKLGFKKGKKNSTEAKSIKEVAPLKQKRRKESPLSKKRTSNKNGNSRGKKLVK GT:EXON 1|1-460:0| BL:SWS:NREP 1 BL:SWS:REP 1->365|CSHA_GEOKA|e-107|50.7|365/467| SEG 401->418|knkkplngklgfkkgkkn| BL:PDB:NREP 1 BL:PDB:REP 21->360|2db3A|2e-69|41.6|339/420| RP:PDB:NREP 1 RP:PDB:REP 1->356|1cu1A|1e-71|10.3|319/645| RP:PFM:NREP 2 RP:PFM:REP 26->186|PF00270|1e-38|49.7|161/167|DEAD| RP:PFM:REP 260->334|PF00271|1e-19|53.3|75/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 26->189|PF00270|6.8e-55|41.7|163/167|DEAD| HM:PFM:REP 260->335|PF00271|3.1e-31|48.7|76/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 1 RP:SCP:REP 17->346|1pjrA1|9e-57|12.0|309/315|c.37.1.19| HM:SCP:REP 69->357|1wp9A2|2.3e-73|39.2|268/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 11435 OP:NHOMOORG 1091 OP:PATTERN --1222444444445312233112111111111111111221122332133341---22212221-13 1231333333332332322-23113422222233333555-42443532555444423--5532443565221112221142-11111777726443--7398747BA38--------------2321222233221111111131312322211--2323212214355311111111111151211--1135777777776777777636666777333446466666675544444444444444444445454554444444445554444233333333333333333333323333333333333333333333333-634866666667673533544455-2-132116535-1121------215-5323322212444444223433333333333333-4444434424224444343333334424444354455434444444436664333------------111111211111211111333325555455555555555555555554555645462455565755576655566464464333333352345674925254225333-554545655454485524--1-------1111111116111533BB8857E7ABBBEEEEEEEEEEECEEDEDD1-2232411111165666666666666666-66666666666566666666666655666666666666565566665666651655667755667114522222444447559434444344444444222222222267788798788788877683222222226CCCCAAAAAADDCC55667666663333233-554433--------21322232---1--12---11121-11122111------35 XUPRXXS5*TPLUTVORRPOPPPPPOQPPQPQPNOOOROPNPPOPPRRQOQPSSQQQSPPPPQPPPPPHQRQPPPQRKRRPPNPPNMN-NfRRQVVSORORORcfdCW*b*lylskyaWYSYeWwsU*X**q3zm*RZaUnYciVTbdWUgTP*WkZXbe*yjbXXYlbg*kppXObch*gfcUbyp**R*xYafZbbh --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---- STR:NPRED 397 STR:RPRED 86.3 SQ:SECSTR EEETTEEEEEEEEEHHHHHHHHHccccccccccccccccEEEEEEccccccTTTHHHHHHHTTTTTTcccccEEEEEccHHHHHHHHHHHHHHTHHTTccEEEcccccEEEcccccccccccEEEEEHHHHHHHTcccTTcccEEEEETTTcccHHHHHHHHHHHHHTTTTTccEEEEEEcccTTccccccTTEEEEEccccccEccccccEEcccEEEccHHHHHEETTEEEcGGGTcccEEEEEccccHHHHHHHHHHHHTTccEEEEcTTcccccccccccEEEEEcTTHHHHccccccEEEEccEEEEEEEEcccEEEEEEEEccHHHHHHHHTTccccccEEEEEccccccHHTTccccccccHHcccEEccHHHHHHHHccGGHHHHHTTc############################################################### DISOP:02AL 373-461| PSIPRED cccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHccccEEEEccHHHHHHHHcccccccccEEEEEEcccHHcccccHHHHHHHHHHccHHHcEEEEEccccHHHHHHHHHHccccEEEEEccccccccccEEEEEEEcHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccEEEEccHHHcccccccccEEEEccccccHHHHccccccccccccccEEEEEEcHHHHHHHHHHHHHHccccccccccHHHHHHHcHHHHHHHHHHHHHcccccccHHccccccccccccccccccccccccccccHHHHHHHHHHHcHHccccccHHccccccHHccc //