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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48610.1
DDBJ      :             DNA polymerase III, delta prime subunit
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  907/915 : Eukaryota  40/199 : Viruses  0/175   --->[See Alignment]
a.80.1c.37.1
:335 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->205 1xxhB PDBj 2e-28 33.5 %
:RPS:PDB   4->325 1a5tA PDBj 1e-24 26.3 %
:RPS:SCOP  4->205 1jr3A2  c.37.1.20 * 3e-49 32.3 %
:RPS:SCOP  210->325 1a5tA1  a.80.1.1 * 3e-07 21.2 %
:HMM:SCOP  4->208 1a5tA2 c.37.1.20 * 1.8e-57 37.1 %
:HMM:PFM   31->165 PF00004 * AAA 3.9e-06 26.7 101/130  
:HMM:PFM   4->51 PF01078 * Mg_chelatase 1.8e-05 31.1 45/207  
:BLT:SWISS 12->325 HOLB_BACSU 1e-39 29.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48610.1 GT:GENE ABO48610.1 GT:PRODUCT DNA polymerase III, delta prime subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 68217..69224 GB:FROM 68217 GB:TO 69224 GB:DIRECTION + GB:PRODUCT DNA polymerase III, delta prime subunit GB:NOTE TIGRFAM: DNA polymerase III, delta prime subunit KEGG: sat:SYN_02985 DNA polymerase III, gamma subunit GB:PROTEIN_ID ABO48610.1 GB:DB_XREF GI:134050639 InterPro:IPR004622 LENGTH 335 SQ:AASEQ MCRLSNIIGHQQIIQTLKNAVQKSRVAHAYLFMGPPGIGKQTVARSFAQVLLCEAPQGGDACGNCKSCRQTDGGNHPDLHLLRPSGVTIKIEQIRELQRQVQYKPYQGIRHVFILEKSETMTQEAANCFLKTLEEPGSATVFILLSDQPYGLLPTILSRCQQLQFRSLSNQEVSEGLRVLCQVARDRAEELAPLASGSIGRAIQLAGGEDQWPLREKALWLVQRFPQMSQYQALQAAEELSNDRSAAVEALEIMLLWFRDLLVYHYTRQKEILINQDKIDTLLEQENWYAPSKVVEIIEEIKLAKERLMANANTRMALEVMMLKINSYGGNNDVG GT:EXON 1|1-335:0| BL:SWS:NREP 1 BL:SWS:REP 12->325|HOLB_BACSU|1e-39|29.7|310/329| BL:PDB:NREP 1 BL:PDB:REP 5->205|1xxhB|2e-28|33.5|200/364| RP:PDB:NREP 1 RP:PDB:REP 4->325|1a5tA|1e-24|26.3|300/324| HM:PFM:NREP 2 HM:PFM:REP 31->165|PF00004|3.9e-06|26.7|101/130|AAA| HM:PFM:REP 4->51|PF01078|1.8e-05|31.1|45/207|Mg_chelatase| RP:SCP:NREP 2 RP:SCP:REP 4->205|1jr3A2|3e-49|32.3|201/240|c.37.1.20| RP:SCP:REP 210->325|1a5tA1|3e-07|21.2|104/117|a.80.1.1| HM:SCP:REP 4->208|1a5tA2|1.8e-57|37.1|205/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1745 OP:NHOMOORG 954 OP:PATTERN 11---------------2----1--------1---1------1------------------------- 2221222222222222222-22222222222222222222212222222222222222222222222222222222222222222222112212222-222222212222122222222111112222122222222212222222235122222222222222222442222222222222222211222222222222232222242222222222222422222222222222222222222222222222222222222222222222222-2222222222222222222222222222222221222222222222222222222223323222222222222222222222222222222222112122222122222222122222122222222222222-1231121221212222222222222222122222222222222222212222222112111111111111111111111222221222222222122222221111112111111122122221122221222222221222222222222222211222222222222122221222222222222222222111111111111111-111111111222222222222222222222222222222222-2222222122221222222222222222-22222222222222222221112222221222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222221111111112222222222222222222222222222211212222221111111121211111-11111111111111111111211121212212 ------------11------------------------------------11-1-----------111-------1--1-------1---------11111-2----1----------1-------11-------1------1---1---1------------1-1----2----21-1------4536-52--21-1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 327 STR:RPRED 97.6 SQ:SECSTR ##cccccGGGHHHHHHHHHHHHTTccccEEEEEccTTccHHHHHHHHHHHHTcccccTTccccccHHHHHHHHTccTTEEEEccTcccccHHHHHHHHHHTTcccTTcccEEEEEccGGGccHHHHHHHHHHHTcccTTEEEEEEEccGGGccHHHHTTcEEEEcccccHHHHHHHHHHHccTTTccccHHHHHHTTcHHHHHHTTccHccHHHHHHHHHHTTccTTccGGHHHHHHHHHHHHHcccGGGHHHHccTTHHHHHHHHHHHTcccccTTcHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHH###### DISOP:02AL 1-1,331-336| PSIPRED cccHHHHcccHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHHHHcccccccEEEEEEcHHHccHHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHEEEEcccccHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccc //