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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48645.1
DDBJ      :             transcriptional regulator, GntR family
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  533/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.5a.78.1
:230 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->222 3fmsA PDBj 4e-14 28.3 %
:RPS:PDB   15->219 1e2xA PDBj 5e-34 16.1 %
:RPS:SCOP  15->83 1e2xA1  a.4.5.6 * 4e-16 27.5 %
:RPS:SCOP  56->219 1e2xA2  a.78.1.1 * 3e-18 14.0 %
:HMM:SCOP  9->109 1v4rA1 a.4.5.6 * 1.8e-20 55.7 %
:RPS:PFM   19->79 PF00392 * GntR 2e-11 60.7 %
:RPS:PFM   132->211 PF07729 * FCD 4e-08 32.5 %
:HMM:PFM   89->211 PF07729 * FCD 3.6e-36 38.2 123/125  
:HMM:PFM   19->79 PF00392 * GntR 1.7e-21 55.7 61/64  
:BLT:SWISS 10->191 YDHC_BACSU 3e-22 30.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48645.1 GT:GENE ABO48645.1 GT:PRODUCT transcriptional regulator, GntR family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 101669..102361 GB:FROM 101669 GB:TO 102361 GB:DIRECTION + GB:PRODUCT transcriptional regulator, GntR family GB:NOTE PFAM: regulatory protein GntR, HTH; GntR domain protein KEGG: chy:CHY_0189 transcriptional regulator, GntR family GB:PROTEIN_ID ABO48645.1 GB:DB_XREF GI:134050674 InterPro:IPR000485 InterPro:IPR000524 InterPro:IPR011711 LENGTH 230 SQ:AASEQ MSEPKLAPIKLDAYKPLREIVFETLREAIISGKLEPGERLMEIQLAEEMGVSRTPVREAIRKLELEGFVVMIPRKGAYVAGISLKDVTDVFEVRAALEALAAGLAAERATDKEIDQLERSLLAYSEQTSTQDINKIVETDTDFHELLYKASRNERLLSIITHLREVIQRVRTVSLSQPGRSKDAIEEHRQIVDAIADRNVELAQTLAREHIYSAENIMLNSLKGAQKENG GT:EXON 1|1-230:0| BL:SWS:NREP 1 BL:SWS:REP 10->191|YDHC_BACSU|3e-22|30.4|181/224| SEG 94->109|raalealaaglaaera| BL:PDB:NREP 1 BL:PDB:REP 17->222|3fmsA|4e-14|28.3|191/206| RP:PDB:NREP 1 RP:PDB:REP 15->219|1e2xA|5e-34|16.1|205/222| RP:PFM:NREP 2 RP:PFM:REP 19->79|PF00392|2e-11|60.7|61/64|GntR| RP:PFM:REP 132->211|PF07729|4e-08|32.5|80/125|FCD| HM:PFM:NREP 2 HM:PFM:REP 89->211|PF07729|3.6e-36|38.2|123/125|FCD| HM:PFM:REP 19->79|PF00392|1.7e-21|55.7|61/64|GntR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| RP:SCP:NREP 2 RP:SCP:REP 15->83|1e2xA1|4e-16|27.5|69/73|a.4.5.6| RP:SCP:REP 56->219|1e2xA2|3e-18|14.0|143/149|a.78.1.1| HM:SCP:REP 9->109|1v4rA1|1.8e-20|55.7|88/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 2200 OP:NHOMOORG 546 OP:PATTERN ------2-11-11111-1--------------------------------------------1----- 1-2172133341-143211-12--3L1-1113222269PM-2-676311233CCB332----7-65H9B62----1----1-D--------------------1---1-1--------------------------12242----4-----------------------1-------------3-111-1-513222222221232223A28822223122262-11111148111111111111111111-11-1-22---------221-----1--1111222-11------1----111111111--11------111-25214---1-111-133--11--3222--2422672321-1131112-1-1-12333-----22HBB--7713629978989888B-67C66K6AHJ--RDDGCBJGFMCCFA-2179D7599749111111115331-2-3-------------------------------19--7QMCA86867753332AALG65334393QFGIE2344486444H7N2HD672----1-----------413--823-21--41121222121211-------5-11------------------1-----111133326133333332333324332242----1-1------2252-121111111111-111121212111111111355525122424453444443444441111211---11111111111---------1----33A6---1-1---------56556281--328888678B5AB9A2DCA----------1-1311111222221111111----------1-----------------------------------------------12111--- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 98.3 SQ:SECSTR HHHHHHHccccccGccHHHHHHHHHHHHHHTTcccTTccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEETTEEEEEccHHHHccGGGHHHHHHHcTTTHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHTcGGGHHHHHHHHHHHHHHHHHHHHHHHH#### DISOP:02AL 1-19,220-231| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccHHHHHHHHHHHHcccEEEEcccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //