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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48707.1
DDBJ      :             metal dependent phosphohydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  255/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
a.173.1d.218.1
:472 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->171 1vfgB PDBj 2e-14 32.5 %
:RPS:PDB   22->324 3bjdC PDBj 1e-10 15.2 %
:RPS:SCOP  14->103 1ou5A2  d.218.1.4 * 3e-15 25.6 %
:RPS:SCOP  135->327 1ou5A1  a.173.1.1 * 9e-15 17.7 %
:HMM:SCOP  9->130 1ou5A2 d.218.1.4 * 2.6e-22 38.1 %
:HMM:SCOP  131->472 1miwA1 a.173.1.1 * 2e-36 32.6 %
:RPS:PFM   16->107 PF01743 * PolyA_pol 6e-08 39.1 %
:RPS:PFM   279->323 PF01966 * HD 8e-05 46.7 %
:HMM:PFM   16->133 PF01743 * PolyA_pol 1.2e-20 39.4 109/126  
:HMM:PFM   235->382 PF01966 * HD 9.6e-11 23.2 112/118  
:BLT:SWISS 13->327 CCA_THICR 1e-16 31.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48707.1 GT:GENE ABO48707.1 GT:PRODUCT metal dependent phosphohydrolase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(166455..167873) GB:FROM 166455 GB:TO 167873 GB:DIRECTION - GB:PRODUCT metal dependent phosphohydrolase GB:NOTE PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain SMART: metal-dependent phosphohydrolase, HD region KEGG: tte:TTE0109 tRNA nucleotidyltransferase/poly(A) polymerase GB:PROTEIN_ID ABO48707.1 GB:DB_XREF GI:134050736 InterPro:IPR002646 InterPro:IPR003607 InterPro:IPR006674 LENGTH 472 SQ:AASEQ MSTISMLSQQLSIQTYLVGGAVRDLFLNKIPVDLDFCVTAKVFALAQTLTQQYQGSLVTLDDQREMLRVVTNSWHLDFSPLRDEILEKDLFARDFTLNAMALPVSMGINKYNWQNQIQDPTGGKGDLKKGLLRAASSSSIQQDPLRSLRGIRFAATYNLAIIPETMVLLRQGTRRIEQIAGERLWHELAILFKLPITSFWINYMDQELHFWQYLLPGQLRMAQTKQNHYHVENVWRHCLRTYECLEVILQELSTIPSEGEPLLIHFNQHLSGGRSRCQVLKLAALIHDVGKPDTAVIREDGRISFHGHAEAGVPYAEALATRLKLSRLERHYLVNLVLLHMLPLNLYNSGDRSDLSVYRLFRSLENYILDVLILSLADVTATLTAGERISELEAYRTFILNLLGKFIVEKDRFHPVPYLSGAALLELGIPEGPEVGLILEKLCEEQVTGSITDTKTALLWVKTKLAGNNKDK GT:EXON 1|1-472:0| BL:SWS:NREP 1 BL:SWS:REP 13->327|CCA_THICR|1e-16|31.5|273/416| SEG 122->132|ggkgdlkkgll| SEG 331->347|hylvnlvllhmlplnly| BL:PDB:NREP 1 BL:PDB:REP 4->171|1vfgB|2e-14|32.5|157/358| RP:PDB:NREP 1 RP:PDB:REP 22->324|3bjdC|1e-10|15.2|244/320| RP:PFM:NREP 2 RP:PFM:REP 16->107|PF01743|6e-08|39.1|92/123|PolyA_pol| RP:PFM:REP 279->323|PF01966|8e-05|46.7|45/117|HD| HM:PFM:NREP 2 HM:PFM:REP 16->133|PF01743|1.2e-20|39.4|109/126|PolyA_pol| HM:PFM:REP 235->382|PF01966|9.6e-11|23.2|112/118|HD| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF01743|IPR002646| GO:PFM GO:0006396|"GO:RNA processing"|PF01743|IPR002646| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF01743|IPR002646| RP:SCP:NREP 2 RP:SCP:REP 14->103|1ou5A2|3e-15|25.6|90/140|d.218.1.4| RP:SCP:REP 135->327|1ou5A1|9e-15|17.7|181/204|a.173.1.1| HM:SCP:REP 9->130|1ou5A2|2.6e-22|38.1|113/152|d.218.1.4|1/1|Nucleotidyltransferase| HM:SCP:REP 131->472|1miwA1|2e-36|32.6|258/265|a.173.1.1|1/1|Poly A polymerase C-terminal region-like| OP:NHOMO 285 OP:NHOMOORG 256 OP:PATTERN -------------------------------------------------------------------- 11--111111111111111-111111111111111111111111-1111111111-1-11--111111111-------1----21112111111111--11111-111-1---------------111-----11-111112221-11111111111111111111111111111111111111----222------------------12--------------------1-------------------1-1-------------------1-------------1111111111111--------------11---1111-2-11111111111112111---1-21-1-1122222112221222-----2---------------------------------------------------------------------------------------------------------------------------------------------------------------------1------1----------1111111-------1112111-1111---1--1121------112------------------------1111---------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------111------------------1-----------------------------------------1-111----------------------------11-11111-1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------ STR:NPRED 278 STR:RPRED 58.9 SQ:SECSTR ###HHHHHHHTTccEEEETHHcTTcHHTcccHHHHHHHHHHHHHHHHHHHHHHcccGGGHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcGEccGGEccccHHHHHHGGcHHHHHTTTcccHHHHHHHHHHHHHHHTTHHHHHHHHHcccHHHHHHHHHHHHHHTTTTcGGGcHHHHHHHHHHHTTccccTTc#cccHHHHHHHHHHHHHHHc#######ccTHHHHHHHHHHHTcc################################cHHHHHHHHHHTTc###cTTTTHHHHTTcccccGGGcTTHHHHH#################################################################################################################################################### DISOP:02AL 469-473| PSIPRED cHHHHHHHHHcccEEEEEcHHHHHHHcccccccEEEEEcccHHHHHHHHHHHcccEEEEEccccEEEEEEEccEEEEEEccccccHHHHHHHHHccEEEEEEccccccccccccccEEccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHcHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccHHHcccccccccHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccc //