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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48802.1
DDBJ      :             tryptophan synthase, beta chain
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  753/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
c.79.1
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->392 1v8zB PDBj e-140 60.8 %
:RPS:PDB   6->389 2cloB PDBj e-104 54.0 %
:RPS:SCOP  6->389 1a50B  c.79.1.1 * e-105 54.0 %
:HMM:SCOP  2->391 1qopB_ c.79.1.1 * 1.2e-161 54.2 %
:RPS:PFM   56->364 PF00291 * PALP 6e-29 40.0 %
:HMM:PFM   54->378 PF00291 * PALP 6.4e-45 31.9 276/297  
:BLT:SWISS 3->392 TRPB_METCA e-159 67.9 %
:PROS 81->95|PS00168|TRP_SYNTHASE_BETA

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48802.1 GT:GENE ABO48802.1 GT:PRODUCT tryptophan synthase, beta chain GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 254189..255379 GB:FROM 254189 GB:TO 255379 GB:DIRECTION + GB:PRODUCT tryptophan synthase, beta chain GB:NOTE KEGG: ppd:Ppro_1291 tryptophan synthase, beta subunit TIGRFAM: tryptophan synthase, beta subunit PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit GB:PROTEIN_ID ABO48802.1 GB:DB_XREF GI:134050831 InterPro:IPR001926 InterPro:IPR006653 InterPro:IPR006654 LENGTH 396 SQ:AASEQ MQPDHRGYFGPYGGAFVPETLMPALEELIQAYGAASEDEEFLKEVTYYLNDYVGRPSPIYFARALSEGTGGAKIFLKREDLNHTGAHKINNTIGQLLLARRMGKKRIVAETGAGQHGVATATVSAMLGMQCVVYMGEEDIRRQALNVFRMRLLGAEVVKVSSGTGTLKDAMNEAMRDWVTNVRNTFYVIGSVAGPHPYPKMVRDFQSIIGREAREQMLKKTGRLPDYVVACVGGGSNSMGIFYPFLEDQEVHLVGVEAGGLGLSSGQHAAPLTVGRPGVLHGSYSYLMQDSHGQVHSVYSISAGLDYPGVGPEHSYLRDAGRVRYTVATDKEALEAFHLLCRTEGILPALESSHALVEAVKLAKVLDNSHNILVCLSGRGDKDVHTVAEGMGEELV GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 3->392|TRPB_METCA|e-159|67.9|390/405| PROS 81->95|PS00168|TRP_SYNTHASE_BETA|PDOC00152| BL:PDB:NREP 1 BL:PDB:REP 8->392|1v8zB|e-140|60.8|385/387| RP:PDB:NREP 1 RP:PDB:REP 6->389|2cloB|e-104|54.0|383/390| RP:PFM:NREP 1 RP:PFM:REP 56->364|PF00291|6e-29|40.0|275/293|PALP| HM:PFM:NREP 1 HM:PFM:REP 54->378|PF00291|6.4e-45|31.9|276/297|PALP| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| RP:SCP:NREP 1 RP:SCP:REP 6->389|1a50B|e-105|54.0|383/390|c.79.1.1| HM:SCP:REP 2->391|1qopB_|1.2e-161|54.2|389/390|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| OP:NHOMO 1216 OP:NHOMOORG 941 OP:PATTERN 22111-112222222212212122111212122121111111122122222221221121-2111-11 1121212211111111111-12111311111122221222121111111111121111--222111111111111111--11221211221212---111-111111111-11-111-21-----22222222222222222221211211111111111111111112211111111111111111122111111111111-111111111111111221111111111112-1111111111111111111----11-----11--11----1-111-------21111111111111-------------2--111----22-11-------1-12-221---2-2--11122222222212121121111211111-----111111112222211111111111-11111111111-1111111111111111111122221111111111111111212-----------------------------111111111111111111111111111111-1111111111111111222112121122111121111111111212-2122222222222121222242222221122211111111111111111112221211111121211111111111111111111122---122211---111111111111111111-1111111111111112111111111111111111111111111111111111-11111112111111-1111-1111111212111111-11111-1122222211221111111111111112111111111111211111111112111111111111111111121111111----------1-------------------------1212121212122 --11--1-----11111112243454311111111111111111111111221211111211111111-1111211111111111111-12111111111-21112-111-----------------------------------------------------2---------2-1111Q1112151771322131111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 395 STR:RPRED 99.7 SQ:SECSTR #cTTcccEETTEEEEEccGGGHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHTTcccccEEEcccTTTTccHEEEEEEEGGGcTTccTHHHHHHHHHHHHHHTTccEEEEEEcccHHHHHHHHHHHHHTcEEEEEEEHHHHHHcHHHHHHHHHTTcEEEEEccTTccHHHHHHHHHHHHTTTTTTEEEEcccccccTTHHHHHHHTTTHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHGGGTTcTTcEEEEEEEEETcGGGTccccHHHHcEEEEETEEEEEEcccTTccccccccccGGGccccccHHHHHHHHTTccEEEEEEHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcTTccEEEEEEEccccGGGHHHHHHHHHHTTT DISOP:02AL 1-4| PSIPRED ccccccccccccccEEccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHcccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccEEccccccccccccccccccEEEccccccccccHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHcccEEEcHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHccccc //