[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48818.1
DDBJ      :             Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  94/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.56.6d.309.1
:467 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   304->457 1zq7A PDBj 1e-16 31.6 %
:RPS:PDB   2->272 1b4uB PDBj 2e-23 18.9 %
:RPS:SCOP  2->272 1b4uB  c.56.6.1 * 1e-25 19.3 %
:RPS:SCOP  303->467 1vajA1  d.309.1.1 * 3e-18 34.1 %
:HMM:SCOP  1->291 1bouB_ c.56.6.1 * 1e-49 32.4 %
:HMM:SCOP  294->467 1zq7A1 d.309.1.1 * 1.3e-47 39.3 %
:RPS:PFM   33->263 PF02900 * LigB 1e-11 30.4 %
:RPS:PFM   303->466 PF01871 * AMMECR1 2e-25 41.4 %
:HMM:PFM   303->465 PF01871 * AMMECR1 1.6e-41 36.4 162/172  
:HMM:PFM   8->266 PF02900 * LigB 3.8e-36 26.9 249/272  
:BLT:SWISS 6->466 Y1956_THETN e-107 45.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48818.1 GT:GENE ABO48818.1 GT:PRODUCT Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 271656..273059 GB:FROM 271656 GB:TO 273059 GB:DIRECTION + GB:PRODUCT Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GB:NOTE PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B KEGG: mta:Moth_2295 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GB:PROTEIN_ID ABO48818.1 GB:DB_XREF GI:134050847 InterPro:IPR002733 InterPro:IPR002737 InterPro:IPR004183 LENGTH 467 SQ:AASEQ MTIVFCGIMPHPPIALPEVGGAESDKIMATRKAMLELGYRIKESGAETLVMISPHSTVFGDAIAINGLLEATGDMSRFGAPQVALHYKYDKDLGSEIGWQSEDLGLPVVEVDKKMASKLGVNLELDHGFMVPLYYLAKAGLQLPLVPCSMGVFLPEKLYAFGVAVKNAAEATQTKVAVVASGDLSHRLTPDAPAGYDEKGKEFDQAIVSLIKAMDVPGLINLEEDLCERAGECGLRPITMMLGALDGLAVKSEVLSYEGPFGVGYMIATLTPLGSDPKREILLKLREERKKKLALERARESYLVQVARQSLESYLQGQWKDLASYDIPKEYSGAAGTFVSFKKGGNLRGCIGTTAPTRANIIQEVAYNAVSAGTQDPRFYPIRLDELDELTISVDVLMSPEPISGLDQLDVKRYGVIVRRGSRSGLLLPDLEGVDTPQQQVDIAKQKAGIGPDEEVQLERFEVIRYR GT:EXON 1|1-467:0| BL:SWS:NREP 1 BL:SWS:REP 6->466|Y1956_THETN|e-107|45.0|449/458| SEG 278->300|kreillklreerkkklalerare| BL:PDB:NREP 1 BL:PDB:REP 304->457|1zq7A|1e-16|31.6|152/197| RP:PDB:NREP 1 RP:PDB:REP 2->272|1b4uB|2e-23|18.9|259/298| RP:PFM:NREP 2 RP:PFM:REP 33->263|PF02900|1e-11|30.4|224/265|LigB| RP:PFM:REP 303->466|PF01871|2e-25|41.4|162/172|AMMECR1| HM:PFM:NREP 2 HM:PFM:REP 303->465|PF01871|1.6e-41|36.4|162/172|AMMECR1| HM:PFM:REP 8->266|PF02900|3.8e-36|26.9|249/272|LigB| GO:PFM:NREP 3 GO:PFM GO:0006725|"GO:cellular aromatic compound metabolic process"|PF02900|IPR004183| GO:PFM GO:0008198|"GO:ferrous iron binding"|PF02900|IPR004183| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02900|IPR004183| RP:SCP:NREP 2 RP:SCP:REP 2->272|1b4uB|1e-25|19.3|259/298|c.56.6.1| RP:SCP:REP 303->467|1vajA1|3e-18|34.1|164/203|d.309.1.1| HM:SCP:REP 1->291|1bouB_|1e-49|32.4|275/0|c.56.6.1|1/1|LigB subunit of an aromatic-ring-opening dioxygenase LigAB| HM:SCP:REP 294->467|1zq7A1|1.3e-47|39.3|173/0|d.309.1.1|1/1|AMMECR1-like| OP:NHOMO 169 OP:NHOMOORG 148 OP:PATTERN --1111212222222-11111111-----1--11111111111-1-111111112222122---1111 -1---------------------------------------------------------------------------1--11-11111-----------------------------------------------------11111-------11---------------------------------11-1-----------------------------------------------------------------------------------------------------------------------------------11-11------------11------1-----11111111421111112---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-1-1-111-1---1-1111111111111--12--------------------1-1---------------------------------------11--------------------------------------------------------------------------------------------------11111-1----------------------------------1------------------------1--------------------------1---------------1---------------------------1111111111-1- ------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 431 STR:RPRED 92.3 SQ:SECSTR #EEEEEEEEcccHHHHHHHTcTTcTTTHHHHHHHHHHHHHHTcTTTcEEEEEEcccccccTTccEEEcccEEccccccccccccccEEccHHHHHHHHHHHHHTTcccEEEcHHH######cccccHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHHHTcccEEEEEEEcccccccccTTTTcccHGGcHHHHHHHHHHHHcHHHHTTccHHHHHHHHcTTGGHHHHHHHHTccccEEEEEEEEEEEETTEEEEEEEEEE#############################HHHHHHHHHHHHHHHHcccccccccccGGGGccccEEEEEEETTEEEEEEEEcccccccHHHHHHHHHHHHHHccTTcccccGGGHGGcEEEEEEEcccEEccccHHccTTTcEEEEEETTEEEEEcTTHHHHTTcHHHHHHHHHHTTccGGGGTTEEEEcEEEEE PSIPRED ccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEccHHHHHcccccccccccHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHcccccHHHHHHHHHHHHcccccEEEEEEEccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccHHHcccccEEEEEEEccEEEEEccccccccccHHHHHHHHHHHHHccccccccccHHHccEEEEEEEEccccEEcccHHHcEEccEEEEEEEccEEEEEEccccccccHHHHHHHHHHHccccccccEEEEEEEEEEEc //