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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48819.1
DDBJ      :             Radical SAM domain protein
Swiss-Prot:             

Homologs  Archaea  61/68 : Bacteria  147/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   81->240 3cb8A PDBj 7e-08 24.2 %
:RPS:PDB   125->281 3canA PDBj 1e-18 16.6 %
:RPS:SCOP  73->244 1tv7A  c.1.28.3 * 1e-17 22.2 %
:HMM:SCOP  35->280 1r30A_ c.1.28.1 * 2.8e-34 25.1 %
:RPS:PFM   79->234 PF04055 * Radical_SAM 2e-06 29.6 %
:HMM:PFM   79->236 PF04055 * Radical_SAM 2.7e-22 24.7 154/166  
:BLT:SWISS 1->286 Y808_METJA 3e-75 50.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48819.1 GT:GENE ABO48819.1 GT:PRODUCT Radical SAM domain protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 273099..273959 GB:FROM 273099 GB:TO 273959 GB:DIRECTION + GB:PRODUCT Radical SAM domain protein GB:NOTE PFAM: Radical SAM domain protein SMART: Elongator protein 3/MiaB/NifB KEGG: chy:CHY_2267 radical SAM domain protein GB:PROTEIN_ID ABO48819.1 GB:DB_XREF GI:134050848 InterPro:IPR006638 InterPro:IPR007197 LENGTH 286 SQ:AASEQ MQEAMFYHQKENGLLFCELCPKGCSIREGHKGFCRVRENQKGVLYTLNYGKVSSYAMDPMEKKPLYHFYPGTLILSLGTVGCNLRCGFCQNWQIAHGDPHTLNLKPREAVELALEQRKKGFPCTGIAYTYSEPFMWYEYVYDTSRLAREAGLKNVMVTNGYVREEPLKKLLPFIDAMNIDVKGFTDRYYRESCVGHLEPVKRTVEIAHQECHVELTTLLVPELNDTPDEISELVDWVASLNPEIPLHFSRYFPNYQFDQPPTPLETMQRAYEIAKRKLKNVHLGNV GT:EXON 1|1-286:0| BL:SWS:NREP 1 BL:SWS:REP 1->286|Y808_METJA|3e-75|50.7|278/333| BL:PDB:NREP 1 BL:PDB:REP 81->240|3cb8A|7e-08|24.2|157/244| RP:PDB:NREP 1 RP:PDB:REP 125->281|3canA|1e-18|16.6|151/158| RP:PFM:NREP 1 RP:PFM:REP 79->234|PF04055|2e-06|29.6|152/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 79->236|PF04055|2.7e-22|24.7|154/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 73->244|1tv7A|1e-17|22.2|167/327|c.1.28.3| HM:SCP:REP 35->280|1r30A_|2.8e-34|25.1|239/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 268 OP:NHOMOORG 210 OP:PATTERN 111122111111111121333312-----1--112111212112212322432311111121114111 -1---------------11-1-----11111--------------------------------------------1-1--11-21111-------------------------------------11-------1-111221121---1-----1----------1--------------------1111-------------------------------------------------------------------------------------------------------------------------------------11-1-111111--11--11111---2-----1111111233111-11111-1----------------------------------------1----------------------------------------------1-1-----------------------------------------------------------------11--------------1----11---------------111-212-111121111-1111111341121-122--------------------1-12211--1-------1-------1----1-1--11-----11--------------------------------------------------------------------------------------------------11111-1-----------------------------------------------------------1--------------------------1---------------1---------------------------1111111111-1- -----------1-------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 240 STR:RPRED 83.9 SQ:SECSTR ###########################################cccHHHHHHHHccccTTcTTTccccTTEEcccccEEEEcccccTTcTTTTTcccTTTccccccHHHHHHHHHHHTcTTTcccEEEcccTGGGcHHHHHHHHHHHHHTTccEEEEcTTcccHHHHHHHHTcHcEEEEEccccHHHHHHHHccccHHHHHHHHHHHHTTccEEEEEEEccTTTccHHHHHHHHHHHHHcccccEEEEEEcccccGGGcccccHHHHHHHHHHHHHTTccEEE### DISOP:02AL 1-3| PSIPRED cccccccEEccccEEEEEEcHHHcccccccEEEcccccccccEEEEcccccEEEEcccccccccccccccccEEEEEEEccccccccccccHHHcccccccccccHHHHHHHHHHHHHccccccEEEEEcccHHccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHccccEEEEEEccccHHHHHHHccccHHHHHHHHHHHHHcccEEEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHHHHHHHHHHHccEEEEccc //