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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48824.1
DDBJ      :             carbamoyl-phosphate synthase large subunit
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  820/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
a.92.1c.24.1c.30.1c.98.2d.142.1
:1074 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->1043 1bxrA PDBj 0.0 47.7 %
:RPS:PDB   1->1043 1c30A PDBj 0.0 44.8 %
:RPS:SCOP  1->127 1a9xA3  c.30.1.1 * 3e-18 55.9 %
:RPS:SCOP  128->400 1a9xA5  d.142.1.2 * 3e-63 52.0 %
:RPS:SCOP  401->548 1a9xA1  a.92.1.1 * 3e-41 37.8 %
:RPS:SCOP  583->678 2iojA1  c.98.2.2 * 1e-15 13.7 %
:RPS:SCOP  671->930 1a9xA6  d.142.1.2 * 2e-53 42.8 %
:RPS:SCOP  927->1051 1b93A  c.24.1.2 * 3e-19 14.4 %
:HMM:SCOP  4->130 1a9xA4 c.30.1.1 * 2.5e-51 62.8 %
:HMM:SCOP  128->400 1a9xA5 d.142.1.2 * 9.7e-114 57.1 %
:HMM:SCOP  394->550 1a9xA1 a.92.1.1 * 1.4e-52 48.7 %
:HMM:SCOP  550->670 1a9xA4 c.30.1.1 * 1.9e-54 66.1 %
:HMM:SCOP  668->930 1a9xA5 d.142.1.2 * 2.4e-104 55.5 %
:HMM:SCOP  931->1065 1a9xA2 c.24.1.1 * 1.4e-23 38.2 %
:RPS:PFM   6->123 PF00289 * CPSase_L_chain 2e-17 44.1 %
:RPS:PFM   128->315 PF02786 * CPSase_L_D2 6e-34 42.2 %
:RPS:PFM   420->542 PF02787 * CPSase_L_D3 1e-34 55.3 %
:RPS:PFM   554->663 PF00289 * CPSase_L_chain 2e-22 56.2 %
:RPS:PFM   668->867 PF02786 * CPSase_L_D2 1e-30 35.0 %
:HMM:PFM   128->333 PF02786 * CPSase_L_D2 9.6e-84 47.5 204/211  
:HMM:PFM   668->868 PF02786 * CPSase_L_D2 1.6e-41 27.6 199/211  
:HMM:PFM   7->123 PF00289 * CPSase_L_chain 2.5e-26 42.6 101/110  
:HMM:PFM   554->662 PF00289 * CPSase_L_chain 3.3e-25 41.1 95/110  
:HMM:PFM   420->542 PF02787 * CPSase_L_D3 3.9e-47 57.9 121/121  
:HMM:PFM   951->1031 PF02142 * MGS 1.8e-16 37.0 81/95  
:BLT:SWISS 1->1072 CARB_PELTS 0.0 71.7 %
:PROS 164->178|PS00866|CPSASE_1
:PROS 704->718|PS00866|CPSASE_1
:PROS 296->303|PS00867|CPSASE_2
:PROS 832->839|PS00867|CPSASE_2
:REPEAT 2|8->397|554->927
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48824.1 GT:GENE ABO48824.1 GT:PRODUCT carbamoyl-phosphate synthase large subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 278717..281941 GB:FROM 278717 GB:TO 281941 GB:DIRECTION + GB:PRODUCT carbamoyl-phosphate synthase large subunit GB:NOTE TIGRFAM: carbamoyl-phosphate synthase, large subunit PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein KEGG: dsy:DSY2042 hypothetical protein GB:PROTEIN_ID ABO48824.1 GB:DB_XREF GI:134050853 InterPro:IPR000115 InterPro:IPR005479 InterPro:IPR005480 InterPro:IPR005481 InterPro:IPR005483 InterPro:IPR006275 InterPro:IPR011607 InterPro:IPR011761 LENGTH 1074 SQ:AASEQ MPKRKEIKTVLVIGSGPIIIGQAAEFDYAGTQACKALREEGIRVVLVNSNPATIMTDADIADVVYVEPLTWQSIEKIIAKEKPDGLLPTLGGQTGLNMAVELAEQGILDKYGVTLLGTTLETIKRAEDRELFRATMLEIGEPIPESTIASTLEECIEFANKIGYPLIVRPAYTLGGTGGGIVKDEKELTATCHRGLKMSMINQVLLERSVAGWKEIEYEVMRDNADNCITICNMENIDPVGVHTGDSIVVAPSQTLADREYQMLRTASLKIIRALKVAGGCNVQFALDPHSMEYIVIEVNPRVSRSSALASKATGYPIAKLAAKIAIGLNLDEINNPVTGKTTACFEPTLDYVVVKIPRWPFDKFASGDRILGTQMKATGEVMAIDRSFEGALMKAVRSLEIGVDSIQMKGSASWTEMELESKLSRPDDERLFVIAEAFRRYWTMKEIQQLTGIDYWFLEKIKDLVVLEQQIRNVGSLPAQDLLRRAKACGLSDAQIGRLCGKTMQDIRNLRKAYNILPTYKVVDTCAAEFEASTPYYYSTYDWEDEVEVSSRKKVIVLGSGPIRIGQGVEFDYCSVHSVWGLQREKIEAIIINNNPETVSTDFDTADKLYFEPLTIEDVMNIIEKEKPLGVIVQFGGQTAINLAGDLAEMGVKILGTPIEGIDAAEDREKFEKLLKGLGIPQTEGKTATNVEEAQKIAAELGFPVLVRPSYVLGGRAMEIVYNEDQLLKYMSTAVQVSPKHPVLVDKYVRGKEVEVDAIGDGENIFIPGIMEHIERAGVHSGDSIAVYPPQSLNQQEMEQVVDYTLRIGKGLKICGLMNIQYVVGEEGVFVLEVNPRASRTVPVLSKVTGVPMVQAATRCMLGNSLSDMGYGCGLGPVSNYITVKAPVFSFEKLSLVETSLGPEMKSTGEVMGVDQNFSHAFYKAMTAAGLKVAKSGTVLFSVAERDKLEAVAVARQYASLGFKLYATTHTAATLSSAGLPVLNTEDPLSLVRSGKVQMVVNTPTKGKVSGRPGFRLRRLASEYKVPCLTSLDTARAMAVVLTDLLQGEPVLPVSLNQFTKFLNDKEPVQNAG GT:EXON 1|1-1074:0| BL:SWS:NREP 1 BL:SWS:REP 1->1072|CARB_PELTS|0.0|71.7|1068/1083| PROS 164->178|PS00866|CPSASE_1|PDOC00676| PROS 704->718|PS00866|CPSASE_1|PDOC00676| PROS 296->303|PS00867|CPSASE_2|PDOC00676| PROS 832->839|PS00867|CPSASE_2|PDOC00676| NREPEAT 1 REPEAT 2|8->397|554->927| SEG 85->96|gllptlggqtgl| SEG 318->327|iaklaakiai| SEG 824->835|vvgeegvfvlev| SEG 968->979|atthtaatlssa| BL:PDB:NREP 1 BL:PDB:REP 1->1043|1bxrA|0.0|47.7|1040/1073| RP:PDB:NREP 1 RP:PDB:REP 1->1043|1c30A|0.0|44.8|1026/1058| RP:PFM:NREP 5 RP:PFM:REP 6->123|PF00289|2e-17|44.1|102/102|CPSase_L_chain| RP:PFM:REP 128->315|PF02786|6e-34|42.2|185/207|CPSase_L_D2| RP:PFM:REP 420->542|PF02787|1e-34|55.3|123/123|CPSase_L_D3| RP:PFM:REP 554->663|PF00289|2e-22|56.2|96/102|CPSase_L_chain| RP:PFM:REP 668->867|PF02786|1e-30|35.0|198/207|CPSase_L_D2| HM:PFM:NREP 6 HM:PFM:REP 128->333|PF02786|9.6e-84|47.5|204/211|CPSase_L_D2| HM:PFM:REP 668->868|PF02786|1.6e-41|27.6|199/211|CPSase_L_D2| HM:PFM:REP 7->123|PF00289|2.5e-26|42.6|101/110|CPSase_L_chain| HM:PFM:REP 554->662|PF00289|3.3e-25|41.1|95/110|CPSase_L_chain| HM:PFM:REP 420->542|PF02787|3.9e-47|57.9|121/121|CPSase_L_D3| HM:PFM:REP 951->1031|PF02142|1.8e-16|37.0|81/95|MGS| GO:PFM:NREP 12 GO:PFM GO:0003824|"GO:catalytic activity"|PF00289|IPR005481| GO:PFM GO:0008152|"GO:metabolic process"|PF00289|IPR005481| GO:PFM GO:0003824|"GO:catalytic activity"|PF02786|IPR005479| GO:PFM GO:0005524|"GO:ATP binding"|PF02786|IPR005479| GO:PFM GO:0008152|"GO:metabolic process"|PF02786|IPR005479| GO:PFM GO:0004086|"GO:carbamoyl-phosphate synthase activity"|PF02787|IPR005480| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF02787|IPR005480| GO:PFM GO:0003824|"GO:catalytic activity"|PF00289|IPR005481| GO:PFM GO:0008152|"GO:metabolic process"|PF00289|IPR005481| GO:PFM GO:0003824|"GO:catalytic activity"|PF02786|IPR005479| GO:PFM GO:0005524|"GO:ATP binding"|PF02786|IPR005479| GO:PFM GO:0008152|"GO:metabolic process"|PF02786|IPR005479| RP:SCP:NREP 6 RP:SCP:REP 1->127|1a9xA3|3e-18|55.9|127/127|c.30.1.1| RP:SCP:REP 128->400|1a9xA5|3e-63|52.0|273/275|d.142.1.2| RP:SCP:REP 401->548|1a9xA1|3e-41|37.8|148/153|a.92.1.1| RP:SCP:REP 583->678|2iojA1|1e-15|13.7|95/120|c.98.2.2| RP:SCP:REP 671->930|1a9xA6|2e-53|42.8|243/244|d.142.1.2| RP:SCP:REP 927->1051|1b93A|3e-19|14.4|125/148|c.24.1.2| HM:SCP:REP 4->130|1a9xA4|2.5e-51|62.8|121/0|c.30.1.1|1/2|PreATP-grasp domain| HM:SCP:REP 128->400|1a9xA5|9.7e-114|57.1|273/0|d.142.1.2|1/2|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 394->550|1a9xA1|1.4e-52|48.7|152/153|a.92.1.1|1/1|Carbamoyl phosphate synthetase, large subunit connection domain| HM:SCP:REP 550->670|1a9xA4|1.9e-54|66.1|121/0|c.30.1.1|2/2|PreATP-grasp domain| HM:SCP:REP 668->930|1a9xA5|2.4e-104|55.5|263/0|d.142.1.2|2/2|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 931->1065|1a9xA2|1.4e-23|38.2|131/0|c.24.1.1|1/1|Methylglyoxal synthase-like| OP:NHOMO 1723 OP:NHOMOORG 1067 OP:PATTERN --11-11111111111-1111111111111112232231111212221111122-1-----111--21 1121311111111121111-11111111111121111111122111111111112111331111211111211111111-2213442333341211-1112113111111---------------23223333322111221111111121111111111111112122111111111111111112221114333333232323322243333332254414321111114112222222222222232222121111232323222111122311112221111111111111111111111111111111111111111122-21---111-2-2242221112-2-12112144243211111112-11111111111211121111121111322222222223-22222121221222222222233211111111111122111111111111111121111111111---------------1111111111122211111111111111111111111111221111111111111111111122221112111111112111212111111111111112211112222112221212111121121111111121211111211111111211111111111111111111-112111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111212211211---1-11----1--111111112111111112223322222222111111111111111111111111111111111111111112222222--------------------------------------1--11111132 12--113-311-11332342332323222223222223333332223332232333232222423323333342222-3233333222-23223243222222443-32193322342222242632518Q3-4241222312321221252142322237512211323A21613111K1111121442122253223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1067 STR:RPRED 99.3 SQ:SECSTR ccccccccEEEEEccccccTTccTHHHHHHHHHHHHHHHTTcEEEEEccccccGGGcGGGccEEEcccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHTTHHHHTTcEEccccHHHHHHHHcHHHHHHHHHHTTcccccEEEEccHHHHHHHHHHHcccEEEEETTccTTTTcEEEccHHHHHHHHHHHHHHcTTccEEEEEccTTcEEEEEEEEEcTTccEEEEEEEEEcccTTccGGGccEEEccccccHHHHHHHHHHHHHHHHHHTcccEEEEEEEEcTTTccEEEEEEEccccHHHHHHHHHHcccHHHHHHHHTTTccGGGcccGGGTTcccccccccccEEEEEEEccGGGcTTccccccccccccEEEEEEEccHHHHHHHHHHHcccccccccccTTcTTHHHHHHHHHHcccTTHHHHHHHHHHHTccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHTGGccHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHTTcccEEEEccccTTcccccccEEEEEccccccccccccccEEEEccccccTTccHHHHHHHHHHHHHHHHTTcEEEEEcccTTccTTcGGGccEEEcccccHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHTTcccccccHHHHHHHHcHHHHHHHHHHHTcccccccccccHHHHHHHHHHHcccEEccccccEEccHHHHHHHHHHHHHHHHHHHHHcHHccccccccTTcEEEEEEEEEccccEEEEEEEEEEEETTccGGGccEEEccccccHHHHHHHHHHHHHHHHHHTccEEEEEEEEEETTEEEEEEEEccccTTHHHHHHHHcccHHHHHHHHHHTccHHHHTcccccccccccEEEEEEEcGGGGcTTccccccccccccEEEEEEEccHHHHHHHHHHHTTcccccccEEEEEccGGGHHHHHHHHHHHHHHTcEEEEcHHHHHHHHHTTcccTccccHHHHHHTTcccEEEEcccccHHHHHHHHHHHHHHHHTTcEEEccHHHHHHHHHHTGGGccEEEEEEEEEEcHHHHHHHH####### DISOP:02AL 1-3,1071-1075| PSIPRED ccccccccEEEEEcccccEEcHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHcccHHHccEEEEccccHHHHHHHHHHHHHcccccccccccHHHccHHHHHHHHHHHcccEEEcccHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEEEccccccccEEEEccHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEEEcccccEEEEccccccccccEEcccEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccccEEEEEEccccccHHHHHHHHccccHHHHHHHHHcccccHHcccccccccccccccccccEEEcccccccccccccccccccccccEEEEEEEEccHHHHHHHHHHHHccccccccccccccccHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHcccEEEEEEEcccccccccccccEEEEEccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHcccEEEEEcccHHHcccHHHHHHHHHcccccHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHcccEEEcccHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEEEcccccccEEEEEccHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEEEEEEcccEEEEccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccEEEEEEcccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccccccEEEEEEccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHccccccccEEEEEEccccHHHHHHHHHHHHHcccEEEEEEcccEEEcccccccccccHHHHHHHcccEEEEEEccccccccccccHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHcccccccccc //